Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00956 ATGGCCAAGGAACCTTCTCTATGCCTCTTCTTCCTCTCTTTTCTCATTCTCCTATCTTCCGGGACTGCATCTTCACCCTCTGCTGCTACCGCATTCCTCCACAAAAGCAAGATCTTCAAATCTGAGATTCGGTTTTCTGTTAGTGATTATGACATTTTGAACACTCTCACCGGCACCAACCTGTCAGTTGATTTCTTCTTAAACGAAAGCCTGGTTGAAAATTTTGTTTCTTCAAAATCTTCTCCAGTTTCATGGCTGAAAGTTCATCTTTTGAACATTCTTCCACAAGTGGACATCAGAAGCATCATTGTTAGATGTGGCAGCGAGTGCTTAGGCCGAGATGAAATGCCTTTACTCATACCTGTTCTGAAATCAATTCATTCGTTTCTCTCCAATCTTCAACTAGGGAGGGAAGTAAAAGTCTCAGTGGCATTTCCGCTTTCAGTCTTAGAGAATCTGAATGCATCATATGAAAATGATCTTCTTAGGATTGTTGCGTTTGTAAAGAAAATAGATTCATTTATCATGCTAGAAGACGCCGTTGATCGGGAATTAGGCACTGTTCAGTCTGTTATTGAAAGTGCCTCACTTGCTTCTGTTCTTCCTTGCAAAGATGTTCCTGTGGTTTTCACAATCAAGAGCCGTGATATTCCCAGTTCAATGGAGTTAGCTCAATTTAGTGGGGCGGTATCCAAATATCTTGAAGCAGGATCTCATTTTACAGAAAGGATTGTTGCATTGTATGCAGAAGTACAGACAACCACAGGTTTTGTACTGGAAGATCTCAAAAGAGAAGAGGGAGAAGGGATAATTCCTTTGTTCCTGAGAGAAAAGCCAAGCAAAGTCCACATCAGAAGAATTCTCCAAGCCACAACCAATTCACCTACCACAGTTTCCCCAACAAATCCAACCCCACCTACACCAGTCATCTCACCTCCAGATACACCAACCATCATCACAGTTCCTTCCACCAATCCTGTCACAGTTTCCCCCACTAATCCAGGGGCAACACCTGTGACAGTTCCTTCTACCACACCAGCTGCTCCCTTAGCCCCTACAAATCCAGCCAATCCAGGTGCTCAACCAGTTACCAATCCTGCGACCTCTTATCCACCCCCATCAGGAAATGGTCCTGTTACAAATGCCCTTCCTCCTCCTGCAAACACAAATGGTCAAGCCACGCCAGGGGGCGGCCAGAGTTGGTGTGTGGCAAAGACTGGAATTTCAGAAGCTACTCTTCAATCAGCATTGGACTATGCTTGTGGAATGCCAAGTGTAGATTGTTCACAAATACAGCAAGGTGGAAGTTGTTACAATCCGAATTCACTACAAAACCATGCTTCTTTTGCCTTCAACAGCTACTACCAGAAGAATCCCGCGTCAACAAGCTGTGACTTTGGAGGCGCTGCAACCGTAGTTAACACCAATCCAAGCTCGGGTTCTTGCATTTACCCATCTTCTTCAGGGGCAGGCACATCCGGCTCTAATGGTTCACCTTCAGTTTTAGGATCCCAAAGCCCTCCTGATTTAAATACCTCGAATTCAGCTGGTCTGAGGCCTTTTCTTGACTGTATGGTTCTGGTGGTATCATCCTTAGTCAGCGTCAGACTCACTATATAA 1620 0.4457 MAKEPSLCLFFLSFLILLSSGTASSPSAATAFLHKSKIFKSEIRFSVSDYDILNTLTGTNLSVDFFLNESLVENFVSSKSSPVSWLKVHLLNILPQVDIRSIIVRCGSECLGRDEMPLLIPVLKSIHSFLSNLQLGREVKVSVAFPLSVLENLNASYENDLLRIVAFVKKIDSFIMLEDAVDRELGTVQSVIESASLASVLPCKDVPVVFTIKSRDIPSSMELAQFSGAVSKYLEAGSHFTERIVALYAEVQTTTGFVLEDLKREEGEGIIPLFLREKPSKVHIRRILQATTNSPTTVSPTNPTPPTPVISPPDTPTIITVPSTNPVTVSPTNPGATPVTVPSTTPAAPLAPTNPANPGAQPVTNPATSYPPPSGNGPVTNALPPPANTNGQATPGGGQSWCVAKTGISEATLQSALDYACGMPSVDCSQIQQGGSCYNPNSLQNHASFAFNSYYQKNPASTSCDFGGAATVVNTNPSSGSCIYPSSSGAGTSGSNGSPSVLGSQSPPDLNTSNSAGLRPFLDCMVLVVSSLVSVRLTI* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00956 539 Gene3D - 398 491 - -
Lapu6g00956 539 FunFam Glucan endo-1,3-beta-glucosidase 4 396 488 - -
Lapu6g00956 539 PANTHER BETA-1,3 GLUCANASE 347 495 IPR044788 -
Lapu6g00956 539 MobiDBLite consensus disorder prediction 324 347 - -
Lapu6g00956 539 MobiDBLite consensus disorder prediction 365 380 - -
Lapu6g00956 539 MobiDBLite consensus disorder prediction 324 396 - -
Lapu6g00956 539 Gene3D Glycosidases 18 179 - -
Lapu6g00956 539 MobiDBLite consensus disorder prediction 381 396 - -
Lapu6g00956 539 MobiDBLite consensus disorder prediction 491 510 - -
Lapu6g00956 539 SMART X8_cls 400 484 IPR012946 -
Lapu6g00956 539 Pfam X8 domain 401 471 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00956 Lapu-Chr6 9745890 9748359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00956 37 486 Glycoside Hydrolase AT2G05790 28.189 1.39e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00956 - - gmx:100789503 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00956 6 9745890 9748359 Lapu6g00956 6 9745890 9748359 ECH
Lapu6g00956 6 9745890 9748359 Lapu7g00462 7 5262467 5265766 PCT