Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00449 ATGATGAACACAATTGCCCTTATTCGCAACCGCGCCATGAAATCCATTCGCAGGATTCTCATTGGTTCTCAGAACTCATCGCCTTTTCTGTCCACTCTTGCGAATTCTGATAACACTCCTTCTATTGCTAACAATTCGCTGAAACCTCTTTTCAATCATTACCACGCCGATCACCACCCTTTGCCAATGCATCGCATAAAGGGTATTGCACAGAAATTTTTTGGCCATACCTCTTCGAATTTCGCCCCTTTATCAATGCCCTTTGGTTTAATCACATCCAACAGGGACGTATCCACCTTCAAGGTTCGAAATTGCTCAACCTCTGTGGAGACCCGTGGCCATGACAACAATTTTGAGAGGATTTACGTACAGGGTGACATGAATAACGTGAAGCCGTTGGTGATGGAAAGTGCTCATGAGGATGTTACAGATGAGAGAAATTTAGGTGATGAAGTGAATGTGAGTGTGGAGAAGAGTAAATGGGAGGAGTCTGAGGTGGAAAAACAAGCATGGAAGTTGTTGCAGGGCGCCGTTGTGACTTATTGTGGCAACCCTGTGGGGACTGTGGCTGCAAATGATCCTGGTGACAAGCTTCCCTTGAATTATGATCAGGTCTTTCTTAGGGATTTTATCCCTTCAGCACTTGCTTTCTTGCTTAGAGGAGAAAGTGAGATTGTCAAAAACTTTCTTCTTCACACCTTGCAGTTGCAGAGTTGGGAGAAAACAGTAGACTGCTACAGTCCAGGGCAAGGCTTGATGCCCGCAAGTTTCAAAGTTAGAACTGTAGCTCTTGACGAAGATAATCATGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATTGGTCGCGTTGCACCTGTAGATTCAGGATTGTGGTGGATCATCCTCTTGCGGGCTTACGGGAAGCTCACTGGAGATTGCGGCTTGCAAGATAGAGCGGATGTTCAAACAGGCTTAAAAATGATCCTTAACTTGTGTTTAACAGATGGTTTCGATATGTTTCCTTCTCTGCTAGTCACTGATGGCTCTTGCATGATAGACAGGAGAATGGGCATTCATGGTCACCCCCTTGAGATCCAAGCATTATTTTACTCAGCTCTCCGCTGCTCGCGTGAGATGCTTGTTGTGACTAAGGGAACCGATAATCTTATTAGAGCTATTAACAACCGACTCAGTGCTCTGTCATTCCACATTAGAGAATATTATTGGGTGGACATGAAAAAGATTAATGAAATATACAGGTATAAAACAGAAGAGTACTCCATGGATGCCATCAATAAATTCAACATCTATCCAGAACAAATTCCACCGTGGTTAATGGATTGGATTCCAGAAGAAGGTGGATATTTGATTGGCAATTTGCAGCCAGCTCACATGGACTTCAGGTTTTTCACACTTGGAAATCTTTGGTCCATTGTCTCATCATTGGGCACCCCAAGACAGAACCAGGCTATTTTAAATCTGATAGAAGCAAAATGGGATGATCTTGTGGGTCATATGCCTCTTAAGATATGTTATCCTGCCTTGGATAATGAAGAGTGGCGCATAACTACTGGCTGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACCCTTCTGTGGCAGTTCACGCTGGCATGCATCAAAATGGGGAGAATTGAACTTGCCCACAAAGCAGTTGCTTTGGCTGAGAAGAGACTGCCAGTTGATTCTTGGCCTGAATACTATGATACACGCACAGGAAAATTTATTGGAAAACAAGCCCGGATGTATCAAACATGGACCATAGCTGGTTTCCTCACATCCAAGATGCTTTTAAAAGATCATGAGATGGCATCCAGGTTATTCTGGGAGGAGGATTACGAGCTTCTAGACATCTGTGTTTGTGGACTTAGCAAGAATGGCAGGAAAAGGTGTTCCCGTGGTGCTGCGAGGTCTCAGATTCTTGTATGA 1953 0.4398 MMNTIALIRNRAMKSIRRILIGSQNSSPFLSTLANSDNTPSIANNSLKPLFNHYHADHHPLPMHRIKGIAQKFFGHTSSNFAPLSMPFGLITSNRDVSTFKVRNCSTSVETRGHDNNFERIYVQGDMNNVKPLVMESAHEDVTDERNLGDEVNVSVEKSKWEESEVEKQAWKLLQGAVVTYCGNPVGTVAANDPGDKLPLNYDQVFLRDFIPSALAFLLRGESEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDEDNHEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDCGLQDRADVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLVVTKGTDNLIRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSMDAINKFNIYPEQIPPWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPRQNQAILNLIEAKWDDLVGHMPLKICYPALDNEEWRITTGCDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAHKAVALAEKRLPVDSWPEYYDTRTGKFIGKQARMYQTWTIAGFLTSKMLLKDHEMASRLFWEEDYELLDICVCGLSKNGRKRCSRGAARSQILV* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00449 650 FunFam probable alkaline/neutral invertase B 196 602 - -
Lapu7g00449 650 Pfam Alkaline and neutral invertase 170 608 IPR024746 GO:0033926
Lapu7g00449 650 SUPERFAMILY Six-hairpin glycosidases 170 601 IPR008928 GO:0005975
Lapu7g00449 650 PANTHER - 117 633 IPR024746 GO:0033926
Lapu7g00449 650 Gene3D - 201 600 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00449 Lapu-Chr7 5150137 5154127 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00449 - - gmx:100785091 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00449 7 5150137 5154127 Lapu7g00449 7 5150137 5154127 ECH
Lapu6g00973 6 9889922 9893035 Lapu7g00449 7 5150137 5154127 ECH
Lapu6g00973 6 9889922 9893035 Lapu7g00449 7 5150137 5154127 PCT