Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00973 ATGATCACGATCAACCTTGTTTGCAACTGCACCATGAAACCATCCCCCAAGATCCTAATTGGTTACAAGAATTCATCGTTTCTTGCAAGATGCCACCATACTCTAACCATGTCTGCGTCCAATAGCTCCACCACTTCTGGCCTCAATCTTCGTCTCAACACCATGCAGTGCCCTTTTCACGCGCGGGAATTTGGACGCATGATGCATGGTAGCCAACAAGTTTTCGGGTTACCCTCTTCGAGTTTTGGCCAATCAAGTTCCATCGGTTTAAGCTCAACAAGAACCGCAAAACGGGGTGTGTCTGCCATTGCCGGGGTAGACCTCAAATTCAAGTCTCGTGACTTCTCAAGGTCCGTGGAGACATATGAGAACAGTAATGGTAAAATGGTTTACGTAAAGGGTGGCGTGAATGTGAAGCCAGCAGAGGTTGACAATGATGAGGACAATGCTGGAGGAGAGGAAGTGTCTGGTTTAGAAGTTAGTGAGAAGAGTGTGAATGTAGAAGAGGGTGAGAAGGTAGAGGAAGAGGAGACAGAAGTAGAGAAAGAGGCATGGAAGTTATTGCAACAGGCACTTGTGACGTACTGTGACATCCCTGTGGGGACGGTGGCAGCGAATGATTCGAATGATCAACAACCTTTGAATTATGATCAGGTTTTTATAAGGGATTTTATCCCCTCGGCTCTTGCTTTCTTGCTCAAGGGAGAAATCGAGATTGTCAAGAACTTTCTCCTTCACACCTTGCAACTCCAGAGTTGGGAGAAAACAGTAGACTGCTATAGCCCAGGGCAGGGGCTGATGCCTGCTAGTTTCAAAGTTAAAACTATGCAACTTGAAGGGAAAAGTGAAGAAGTTTTAGATCCTGATTTTGGGGAATCAGCTATAGGTCGTGTTGCTCCTGTAGATTCAGGATTGTGGTGGATCATCCTGCTGCGGGCTTATGGGAAGATTACTGGAAACAAAGACTTGCAAGAAAGGTTGGATGTTCAAACAGGCCTAAGAATGATCCTTCATCTGTGCTTATCGGATGGCTTTGACATGTTTCCTTCTCTGTTAGTAACTGATGGATCTTGCATGATAGACAGAAGGATGGGTATTCATGGCCACCCCCTTGAGATTCAGGCCTTGTTTTACTCAGCTCTTCGCTCGGCCCGTGAGATGGTTGCTGAAGATGAAAACTCCAACAATCTGGTTGGAGAAATTAACAACAGACTCAGTGCACTATCATTTCACATTAGAGAATACTATTGGTTGGATTTACAAAAGATGAATGAGATATACAGGTATAAAACAGAAGAGTACTCATTGGATGCCACAAACAAGTTCAACATCTATCCAGATCAAATCCCTTTGTGGCTAATTGATTGGGTTCCAGAGGAAGGAGGATATCTGCTAGGGAATCTGCAGCCAGCTCATATGGATTTCAGGTTTTTCATGCTTGGAAATCTTTGGTCAATTGTTTCCTCTTTGGGCACCCCAAAACAGAATAATGCTATTTTGAATCTGATAGAAACAAATTGGAATGATCTCGTGGGGAAAATGCCTCTAAAGATATGTTATCCGGCCTTGGAGCATCATGAATGGCGAATAATTACAGGCTGTGACCCCAAGAATACCCCTTGGTCATATCACAATGGTGGGTCCTGGCCAACCCTTCTGTGGCAGTTCACACTTGCATGCATGAAAATGAACAGAACTGAACTAGCGGAGAAAGCAATTGCTTTGGCTGAGAAAAGGCTGCCACATGATTCTTGGCCAGAATATTATGACACACGCACAGCAAGATTTATTGGCAAACAAGCACGGCTTTATCAAACTTGGACTTTAGCTGGGTTCCTTGCATCTAAGATGCTTTTGAAGAATTCTAAATTGGCTTCCTTGTTGTGCTGGGAGGAGGATTTTGAGATCCTTGAGACTTGTGTTTGTTTGCTTAACAAGAGTGGCAGAGTCAAATGCTCTCGTGACGCTGCCAAATCTCAGATTCTCGTGTGA 1992 0.4428 MITINLVCNCTMKPSPKILIGYKNSSFLARCHHTLTMSASNSSTTSGLNLRLNTMQCPFHAREFGRMMHGSQQVFGLPSSSFGQSSSIGLSSTRTAKRGVSAIAGVDLKFKSRDFSRSVETYENSNGKMVYVKGGVNVKPAEVDNDEDNAGGEEVSGLEVSEKSVNVEEGEKVEEEETEVEKEAWKLLQQALVTYCDIPVGTVAANDSNDQQPLNYDQVFIRDFIPSALAFLLKGEIEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTMQLEGKSEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGNKDLQERLDVQTGLRMILHLCLSDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVAEDENSNNLVGEINNRLSALSFHIREYYWLDLQKMNEIYRYKTEEYSLDATNKFNIYPDQIPLWLIDWVPEEGGYLLGNLQPAHMDFRFFMLGNLWSIVSSLGTPKQNNAILNLIETNWNDLVGKMPLKICYPALEHHEWRIITGCDPKNTPWSYHNGGSWPTLLWQFTLACMKMNRTELAEKAIALAEKRLPHDSWPEYYDTRTARFIGKQARLYQTWTLAGFLASKMLLKNSKLASLLCWEEDFEILETCVCLLNKSGRVKCSRDAAKSQILV* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00973 663 Gene3D - 208 610 IPR012341 GO:0005975
Lapu6g00973 663 MobiDBLite consensus disorder prediction 142 178 - -
Lapu6g00973 663 Pfam Alkaline and neutral invertase 184 621 IPR024746 GO:0033926
Lapu6g00973 663 SUPERFAMILY Six-hairpin glycosidases 184 614 IPR008928 GO:0005975
Lapu6g00973 663 PANTHER - 127 645 IPR024746 GO:0033926
Lapu6g00973 663 FunFam probable alkaline/neutral invertase B 210 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00973 Lapu-Chr6 9889922 9893035 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00973 - - gmx:100812691 1107.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00973 6 9889922 9893035 Lapu7g00449 7 5150137 5154127 ECH
Lapu6g00973 6 9889922 9893035 Lapu6g00973 6 9889922 9893035 ECH
Lapu6g00973 6 9889922 9893035 Lapu7g00449 7 5150137 5154127 PCT