Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00447 ATGAATCTAGTGTCTGCAGAGATCAAGGCCAAAGCCGAGGTGTACCGTGGAGATGAACTTGGCCAGGAAAAGACCAAGTTGCTGCTGAAGGAGGTAGGGCTACCCAATGGCCTTTTGCCCTTGAAGGACATTGAGGAATGTGGGTACGAGAAGGAAAGTGGGTTTGTGTGGCTGAAGCAGAAGAAGGCCATAAACCACAAGTTTGAGAAGATTGGGAAGCTCGTGTCCTATGCAACTGAGATCACCGCCTATGTTGAGGTTGGTAAGATAAAGAAGCTCACTGGTGTGAAGGCCAAGGAACTCTTGATCTGGGTCACACTGAATGAGATCTTTGTTGATGATCCACCCAGTGGCAAGATCACATTCAAGACCCCTACGGCGTTGTTCAGGACATTCCCAGTCTCAGCTTTTGTGATTGAGGAGCCAGTTAAGGAAGTGAAGAACAAAGATGAAGAAGACAAGGAAGTGAAGAAGGAAGAACTGAAGGAAGTGAAACAAGTTGGCAGTGCTGTTGAAGTCCAAGAGGTTTGA 531 0.4727 MNLVSAEIKAKAEVYRGDELGQEKTKLLLKEVGLPNGLLPLKDIEECGYEKESGFVWLKQKKAINHKFEKIGKLVSYATEITAYVEVGKIKKLTGVKAKELLIWVTLNEIFVDDPPSGKITFKTPTALFRTFPVSAFVIEEPVKEVKNKDEEDKEVKKEELKEVKQVGSAVEVQEV* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00447 176 Gene3D - 4 149 IPR036758 -
Lapu7g00447 176 Pfam Protein of unknown function, DUF538 28 137 IPR007493 -
Lapu7g00447 176 Coils Coil 147 167 - -
Lapu7g00447 176 PANTHER T31J12.3 PROTEIN-RELATED 14 138 IPR007493 -
Lapu7g00447 176 SUPERFAMILY At5g01610-like 4 142 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00447 Lapu-Chr7 5140287 5141179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00447 - - pvu:PHAVU_007G202800g 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00447 7 5140287 5141179 Lapu7g00447 7 5140287 5141179 ECH
Lapu6g00975 6 9897370 9898959 Lapu7g00447 7 5140287 5141179 PCT