Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00975 ATGTCTCTGGTTGCAGAAAATATCAAGAGCAGATCGGAGGTGTACCACGGGGATGAAATCTGCCAAGTGAAGTCCAAAGAGCTTCTCAAGGAAATCGCCCTCCCCAACGGTCTCTTACCCCTCAAAGACATCGAGGAGTGCGGTTACGACAGACAAACAGGCTTCGTCTGGCTCAAACAAAAGGAGAGTTACACTCACAAGTTCGACAAAATCGGTAAACTTGTCTCCTACGCGCCTGAGGTCACTGCCCATGTCGAACAAGGAAAGATCTCTAAGCTCACCGGTGTGAAGACCAAGGAGTTCTTGCTCTGGATCACGCTCAGTGACATCTACGTCGATGACCCTCCTACAGGCAAAATCACCTTCAAAACCCCCGCAGGGCTATTTCGGTCTTTTCCAGTCTCCGCCTTCCAGATTGAGGAGGACCCTCAGGAGAGTAAGCGCGTGGAGGAGTCCGCTGCGGCTGTGCAAGTCAAAGAGGTCTGA 486 0.5165 MSLVAENIKSRSEVYHGDEICQVKSKELLKEIALPNGLLPLKDIEECGYDRQTGFVWLKQKESYTHKFDKIGKLVSYAPEVTAHVEQGKISKLTGVKTKEFLLWITLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFQIEEDPQESKRVEESAAAVQVKEV* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00975 161 SUPERFAMILY At5g01610-like 8 144 IPR036758 -
Lapu6g00975 161 Gene3D - 7 149 IPR036758 -
Lapu6g00975 161 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Lapu6g00975 161 PANTHER T31J12.3 PROTEIN-RELATED 13 140 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00975 Lapu-Chr6 9897370 9898959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00975 - - gmx:100306660 284.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00975 6 9897370 9898959 Lapu6g00975 6 9897370 9898959 ECH
Lapu6g00975 6 9897370 9898959 Lapu7g00447 7 5140287 5141179 PCT