Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00381 ATGTATTGTTGCAGACAGAGGTCAAAGGTTGTTGAGTTCCCGTGTTTTGTTAGGGTGAAATTAGTCGAAAACACTTCGATTCCTACCATAATCGAATCGATTCCGTTCCCAATAATGTCCCAAACACCACCGCAAACCCTCGATTCCGAGGAGGCAACCCCCGCATCGGCCGCCACCGCCCAAACCCCCGACTCCCACGCCGCCACGCTCCTCCATCTCTCCTTCAACCAGGATTCGGGCTGCTTCGCCGCCGCCACCGACCGCGGCTTCCGCATCTACAATTGCGATCCCTTCCGGGAGATCTTCCGCCGCGATTTCGGCCCCGGCGGCGGCGTCGGCCTTGTCCACATGCTCTTCCGCTGCAACATACTCGCCTTTGTCGGCGGGGGCGCCGACCCCCGCTACCCCCCCAATAAAGTTATGATCTGGGACGACCACCAGTCCCGCTGCATCGGCGAGCTCTCCTTCCGCTCCGAGGTGAAGGGCGTCCGTCTACGGCGCGACCGCATCGTGGTGGTCCTGGCGCACAAGATCTTTGTGTACAACTTCTCCGATCTCAAGGTGCTGCACCAAATCGAGACCATCGCTAACCCTAAGGGCCTCTGCGACCTCTCTCACGTTTCCGCCACCATGGTCCTCGTCTGCCCCGGCTTGCAGAAGGGGCAGGTTAGGGTTGAGCACTACGCCTCCAAGAGAACCAAGTTCATCATGGCGCATGATTCCCGAATTGCGTGTTTTGCTCTCACGCATGATGGCAGGTTGCTCGCCACCGCCAGCTCCAAGGGTACCCTCATCAGGCTCTTCAATACCCTCGATGGTTCATTGCTCCAAGAGGTAAGGAGGGGTGCAGACCGAGCAGAGATATACAGCCTTGCATTCTCTCCTACTGCACAGTGGCTGGCTGTCTCAAGTGACAAGGGGACCGTTCATGTTTTCAACCTGAAGGTTGATTCTGGATTGATGGGGCATGACAGATCGCATGGTACTTCGGAGGCTAATCCTGCTAGCCCTACTGCTGTTTCTTCTCTTTCATTTATTAAAGGTGTTCTACCTAAGTATTTTAGCTCGGAGTGGTCCGTGGCTCAATTTCGCTTGCAAGAAGGTTTGCAGTATATTGTTGCATTTGGCCATCAAAAGAATACAATTGTAATACTAGGCATGGATGGCAGGTATGTCAGTAGTGCATCATGTGTATGCTCTTTTAAGTTTGTCATGCTCTGCTTTTTTGTGTTTTGTTTTTGGAAATGGGGGAGGGGTGTTTCGTAA 1266 0.5387 MYCCRQRSKVVEFPCFVRVKLVENTSIPTIIESIPFPIMSQTPPQTLDSEEATPASAATAQTPDSHAATLLHLSFNQDSGCFAAATDRGFRIYNCDPFREIFRRDFGPGGGVGLVHMLFRCNILAFVGGGADPRYPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFSDLKVLHQIETIANPKGLCDLSHVSATMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTHDGRLLATASSKGTLIRLFNTLDGSLLQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLMGHDRSHGTSEANPASPTAVSSLSFIKGVLPKYFSSEWSVAQFRLQEGLQYIVAFGHQKNTIVILGMDGRYVSSASCVCSFKFVMLCFFVFCFWKWGRGVS* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00381 421 SUPERFAMILY WD40 repeat-like 65 315 IPR036322 GO:0005515
Lapu7g00381 421 SMART WD40_4 56 94 IPR001680 GO:0005515
Lapu7g00381 421 SMART WD40_4 229 269 IPR001680 GO:0005515
Lapu7g00381 421 SMART WD40_4 272 313 IPR001680 GO:0005515
Lapu7g00381 421 FunFam Autophagy-related protein 18a isoform A 68 397 - -
Lapu7g00381 421 Pfam WD domain, G-beta repeat 282 313 IPR001680 GO:0005515
Lapu7g00381 421 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 64 393 - -
Lapu7g00381 421 Gene3D - 71 390 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00381 Lapu-Chr7 4575582 4579180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00381 K22991 - gmx:100787427 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00381 7 4575582 4579180 Lapu7g00381 7 4575582 4579180 ECH
Lapu6g00791 6 8236019 8239666 Lapu7g00381 7 4575582 4579180 ECH