Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00294 ATGTCTAGCTCAGCAAAAGTTTTGGATCCTGCATTTCAGGGAGTTGGTCAAAAAGTAGGAACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTTCGTTGCCCAAATCTGATCATGGGAAATTCTACATGGGAGATTCGTACATCATCTTGCAGACAACTCAAGGCAAAGGAGGCACTTATTTTTATGATTTACATTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCTGGAACTGCAGCCATTAAAACTGTTGAACTTGATGCTGCTCTTGGAGGGCGTGCAGTACAGCACAGGGAAATCCAAGGACATGAATCTGACAAGTTTTTGTCATACTTCAGACCATGTATAATACCATTAGAGGGCGGTGTTGCATCTGGGTTTAGAAAACCTGAAGAAGAGGAGTTTGAAACACGTTTGTATGTATGCAGAGGGAAAAGAGTTGTTAGGTTGAGACAGATCCCTTTTGCGAGGTCTTCATTGAACCATGATGATGTATTCATACTAGACACTCAGGATAAGATATACCAATTCAATGGTGCAAATTCCAATATTCAAGAAAGAGCCAAGGCTTTGGAAGTTATACAATTCCTTAAAGAAAAATATCATGAAGGGAAATGTGATGTTGCAATTGTTGATGATGGCAAGTTAGACACGGAGTCTGACTCAGGTGAGTTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTAATCAGTGAGGATGATATTATTCCAGAGACAACTCCTGCTCGGCTTTATAGTATTGCTAATGGTGAGGTTAAGCCCGTGGAAGGTGAATTGTCTAAATCATTGTTGGAAAACAACAAATGCTATTTATTAGATTGTGGTGCTGAGATATTTGTCTGGGTTGGTCGTGTAACACAAGTTGAAGAACGAAAAGCAGCCTGCCAAGCTGTTGAGGAGATTGTTGCAAGCCAAAATAGGCCAAAATCTACTAGGATAACCAGGATTATTCAAGGTTATGAGACACATTCATTTAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCCAATACCAATGCAGAGGAAGGAAGAGGAAAAGTTGCGGCACTGCTTAAGCAACAAGGTATGGGTGTCAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACCTTTGCTTGAAGGAGGTGGGAAGATAGAGGTATGGCGAATTAATGAAAATGCCAAGACTGCATTGCCAAAGGAGGAGATTGGTAAATTTTATAGTGGAGATTGTTATATTGTACTGTACACATACCACACTGGTGAGAGGAAAGAAGACTTCTTCTTGTGCTGTTGGTTTGGCAAAGACAGCATCGAGGAGGACCAAACAACAGCTACTCGGTTGGCCAATTCAATGTTTACCTCTTTAAAGGGTAGACCTGTACAGGGTCGCATATTTGAAGGCAAAGAGTCACCACAATTTGTTGCTATTTTCCAACCGATGGTGGTACTTAAGGGTGGATTGAGCTCTGGATACAAGAAATTAATAGCAGACAAAGATGCATCAGATGAGACATACACATCAGAGTGTATCGCACTTGTTAGAATTTCTGGAACTGCTATTCATAACAATAAATCAGTACAAGTTGATGCATTGCCATCATCATTAAATTCTACTGAGTGTTTTGTCCTGCAATCTGGCTCTACAATTTTCACCTGGCATGGAAATCAGTGTTCCTTTGAGCAGCAACAGCTAGCGGCAAAGGTCGCTGAATTTTTAAGGCCAGGAGTTACTTTGAAGCATGCTAAAGAAGGAACAGAAAGCTCAGCTTTCTGGTCTGCACTAGGAGGAAAACAAACTTACACCAGCAAGAAAGTTGTTAACGAGGTTGTGAGAGATCCACATTTGTTCACCATATCATTCAATAAAGGAAAGTTCAAGGTAGAGGAGGTTTACAACTTCTCTCAAGATGACCTGTTACCAGAGGATATCCTTGTTCTTGACACACATGCAGAAGTGTTTGTTTGGGTCGGTCATTCTGTGGACCCAAAAGAAAAGCAGAATGCTTTTGAAATTGGCCAGAAATACATAGATATGGCTGCATCTCTGGAGGGACTATCTACACATGTACCACTATATAAAGTAACGGAAGGGAATGAGCCTTGCTTTTTCACAACATACTTTTCATGGGATAATGCAAAAGCTATGGTTCAGGGGAACTCATTTCAGAAAAAGGTGGCTTTACTCTTTGGAATTGGCCATGCTGTTGAGGATAAGTCAAATGGGTCAAGTCTAGGTGGACCAAGACAAAGAGCTGAAGCTTTGGCTGCCCTATCTAATGCATTTAGTTCATCATCTGAGAAAGCATCCAGTATGACACAAGATAGATTGAATGGGTTAAGCCAAGGAGGACCAAGACAAAGGGCAGAAGCTTTAGCCGCTTTGAACTCAGCATTTAATTCATCATCTGGGACAAAGCCTGTAACTCCTAAGGCGTCTGGAAAAGGTCAAGGATCACAAAGAGCAGCAGCAGTGGCTGCTCTTTCATCTGTTCTTACGGCTGAAAAGAAGAAAAAATCACCTGATGGTTCTCCTGTGGCTAGCAGTAGTCCTCTCACTGAAAATAGCCCCACTGAAACTAAAAGTGATTCCTCTGAAGTTGAAGAAGTTGCAGAAGCCAAGGAAACAACAGAGGAACTTGCCCCTGAAACTGGTAGCAATGAGGATATGGAACCAAAACAGGAAAATGTGGAGGAGGAAAATGGTAGTGAAAAGACGTTCAGTTATGAACAATTAAAGACTAAATCTGGTAATACTGTGGCTGGAATTGATCTTAATCGGAGAGAGGCGTATCTGTCGGAGGTGGAGTTCAACACTATATTTGGAATGGAAAAGGAAGCATTTTATAAGTTGCCAAGATGGAAGCAAGACATGCTGAAAAAGAAATTCGAATTGTTCTAG 2928 0.4133 MSSSAKVLDPAFQGVGQKVGTEIWRIENFQPVSLPKSDHGKFYMGDSYIILQTTQGKGGTYFYDLHFWIGKDTSQDEAGTAAIKTVELDAALGGRAVQHREIQGHESDKFLSYFRPCIIPLEGGVASGFRKPEEEEFETRLYVCRGKRVVRLRQIPFARSSLNHDDVFILDTQDKIYQFNGANSNIQERAKALEVIQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIIPETTPARLYSIANGEVKPVEGELSKSLLENNKCYLLDCGAEIFVWVGRVTQVEERKAACQAVEEIVASQNRPKSTRITRIIQGYETHSFKSNFDSWPSGSANTNAEEGRGKVAALLKQQGMGVKGMTKSTPVNEEIPPLLEGGGKIEVWRINENAKTALPKEEIGKFYSGDCYIVLYTYHTGERKEDFFLCCWFGKDSIEEDQTTATRLANSMFTSLKGRPVQGRIFEGKESPQFVAIFQPMVVLKGGLSSGYKKLIADKDASDETYTSECIALVRISGTAIHNNKSVQVDALPSSLNSTECFVLQSGSTIFTWHGNQCSFEQQQLAAKVAEFLRPGVTLKHAKEGTESSAFWSALGGKQTYTSKKVVNEVVRDPHLFTISFNKGKFKVEEVYNFSQDDLLPEDILVLDTHAEVFVWVGHSVDPKEKQNAFEIGQKYIDMAASLEGLSTHVPLYKVTEGNEPCFFTTYFSWDNAKAMVQGNSFQKKVALLFGIGHAVEDKSNGSSLGGPRQRAEALAALSNAFSSSSEKASSMTQDRLNGLSQGGPRQRAEALAALNSAFNSSSGTKPVTPKASGKGQGSQRAAAVAALSSVLTAEKKKKSPDGSPVASSSPLTENSPTETKSDSSEVEEVAEAKETTEELAPETGSNEDMEPKQENVEEENGSEKTFSYEQLKTKSGNTVAGIDLNRREAYLSEVEFNTIFGMEKEAFYKLPRWKQDMLKKKFELF* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00294 975 SUPERFAMILY VHP, Villin headpiece domain 911 975 IPR036886 GO:0003779|GO:0007010
Lapu7g00294 975 SMART VILL_6 252 344 IPR007122 GO:0051015
Lapu7g00294 975 SMART VILL_6 139 234 IPR007122 GO:0051015
Lapu7g00294 975 SMART VILL_6 392 490 IPR007122 GO:0051015
Lapu7g00294 975 SMART VILL_6 624 719 IPR007122 GO:0051015
Lapu7g00294 975 SMART VILL_6 520 607 IPR007122 GO:0051015
Lapu7g00294 975 SMART VILL_6 19 117 IPR007122 GO:0051015
Lapu7g00294 975 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Lapu7g00294 975 MobiDBLite consensus disorder prediction 774 830 - -
Lapu7g00294 975 Gene3D Severin 616 736 IPR029006 -
Lapu7g00294 975 CDD gelsolin_S2_like 138 232 - -
Lapu7g00294 975 PANTHER VILLIN 3 965 IPR007122 GO:0051015
Lapu7g00294 975 SUPERFAMILY Actin depolymerizing proteins 9 148 - -
Lapu7g00294 975 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Lapu7g00294 975 MobiDBLite consensus disorder prediction 774 790 - -
Lapu7g00294 975 Gene3D Severin 246 359 IPR029006 -
Lapu7g00294 975 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Lapu7g00294 975 CDD gelsolin_S3_like 254 343 - -
Lapu7g00294 975 MobiDBLite consensus disorder prediction 803 825 - -
Lapu7g00294 975 CDD gelsolin_S1_like 12 124 - -
Lapu7g00294 975 CDD gelsolin_S6_like 622 720 - -
Lapu7g00294 975 Gene3D Severin 133 245 IPR029006 -
Lapu7g00294 975 MobiDBLite consensus disorder prediction 870 915 - -
Lapu7g00294 975 FunFam Villin-like 1 614 735 - -
Lapu7g00294 975 Gene3D Villin headpiece domain 897 975 IPR036886 GO:0003779|GO:0007010
Lapu7g00294 975 FunFam Gelsolin 6 131 - -
Lapu7g00294 975 Gene3D Severin 519 613 IPR029006 -
Lapu7g00294 975 SMART VHP_1 940 975 IPR003128 GO:0003779|GO:0007010
Lapu7g00294 975 Pfam Villin headpiece domain 940 975 IPR003128 GO:0003779|GO:0007010
Lapu7g00294 975 FunFam Villin-like 1 132 247 - -
Lapu7g00294 975 CDD gelsolin_S5_like 520 608 - -
Lapu7g00294 975 FunFam Villin-4 248 354 - -
Lapu7g00294 975 ProSiteProfiles Headpiece (HP) domain profile. 910 975 IPR003128 GO:0003779|GO:0007010
Lapu7g00294 975 Pfam Gelsolin repeat 264 337 IPR007123 -
Lapu7g00294 975 Pfam Gelsolin repeat 29 111 IPR007123 -
Lapu7g00294 975 Pfam Gelsolin repeat 533 583 IPR007123 -
Lapu7g00294 975 Pfam Gelsolin repeat 635 713 IPR007123 -
Lapu7g00294 975 Pfam Gelsolin repeat 410 483 IPR007123 -
Lapu7g00294 975 Pfam Gelsolin repeat 153 217 IPR007123 -
Lapu7g00294 975 Gene3D Severin 5 132 IPR029006 -
Lapu7g00294 975 Gene3D Severin 389 518 IPR029006 -
Lapu7g00294 975 CDD gelsolin_S4_like 386 487 - -
Lapu7g00294 975 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Lapu7g00294 975 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Lapu7g00294 975 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Lapu7g00294 975 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Lapu7g00294 975 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Lapu7g00294 975 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Lapu7g00294 975 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Lapu7g00294 975 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Lapu7g00294 975 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Lapu7g00294 975 MobiDBLite consensus disorder prediction 852 869 - -
Lapu7g00294 975 MobiDBLite consensus disorder prediction 842 921 - -
Lapu7g00294 975 FunFam Gelsolin 519 613 - -
Lapu7g00294 975 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00294 Lapu-Chr7 3546538 3561841 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00294 - - gmx:100788765 1737.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00294 7 3546538 3561841 Lapu7g00294 7 3546538 3561841 ECH
Lapu1g00176 1 7562699 7575448 Lapu7g00294 7 3546538 3561841 PCT