Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00280 ATGGGAGAAGCACCTATTATCATTGGTCAACACCTGCAGAATGGAAATGACGATGGCTTTGAATCAAAAAGTGGGACATTCGAAACGAGTACTATCATTGGTGATAAAAAGTTCGTCATTGGTGGAATCTGTGGTGAAGCTTTATCTGTTAAAGTTCAAATTCTTGATAGCAATTGTCTTGGGGAATGGGTTAATGTTGTTGAGCTAGGTACCAAACCCATTTCATGTAATGGTCACTCAGCCGTGCTTTTGAAAGACAGAATACTAATTCTTAAGAAAAATTCTAACCCAGATGACTGTATATGGTTTCTTGAGGTGGACACTACATATGTCAGGCAGCAGCAGAAAAAAAATTTGGGAACTGAGGTTGTAGCATGGAGTAAGGGTGTGGTAGGAAATGCTGAGAAACCTGTTGTTATCAGTGGTCCTTCTGGAGTAGGTAAAGGAACATTGATATCTATGCTCATGAAGGAATTTCCCTCTATGTTTGGCTTCTCTGTGAGCCACACAACTCGAGCCCCGAGAGGCATGGAGAAAGATGGGGTCCATTACCATTTTACGGAGAAGAATGTTATGGAGAAAGAGATTGAGGATGGAAAGTTTCTGGAGTTTGCTTCTGTCCATGGAAATCTATATGGGACCAGTGTTGAGGCTGTGGAGCTGGTATCAGAGGCAGGGAAAAGATGTATTCTTGATATTGATGTTCAAGGGGCAAGATCTGTAAGGGCTAGTTCTCTAGAAGCCATGTTCATCTTTATCTGCCCCCCATCAATGGGTGAGCTAGAGAAGCGTCTTCGTGACCGAGGGACAGAGACAGAAGAACAAGTCCTAAAGCGATTACGAAATGCTCGGGCTGAGATTGAGCAAGGGAGGTCATCAGGCATATTTGATCACATCTTATACAATGACAATCTTGAGGAGTGCTATGAGAATTTGAAGAAATTATTGGGACTAGATGGATATGCCACTCCTCCCAAGTCTGCTCCAAAAGAGATAAATCTCCCAAGGGATCATTCAGTGTCAAAAATTGATGATAAAATCATCATAAATTCCACCTCTTCAAGACTAGAAAAGGAATCAAAGAACTTGATCATGTTAGACGTGTCCTCACTTAAAGGGGGTGCACCGGGTCGGACAAGAGGGCTTAATTTTGAAGCCATTGACTCGTTTTCAGAAGGCTACAATGACAATGGGAATGGACCAATTTGA 1209 0.4218 MGEAPIIIGQHLQNGNDDGFESKSGTFETSTIIGDKKFVIGGICGEALSVKVQILDSNCLGEWVNVVELGTKPISCNGHSAVLLKDRILILKKNSNPDDCIWFLEVDTTYVRQQQKKNLGTEVVAWSKGVVGNAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKNVMEKEIEDGKFLEFASVHGNLYGTSVEAVELVSEAGKRCILDIDVQGARSVRASSLEAMFIFICPPSMGELEKRLRDRGTETEEQVLKRLRNARAEIEQGRSSGIFDHILYNDNLEECYENLKKLLGLDGYATPPKSAPKEINLPRDHSVSKIDDKIIINSTSSRLEKESKNLIMLDVSSLKGGAPGRTRGLNFEAIDSFSEGYNDNGNGPI* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00280 402 CDD GMPK 137 313 - -
Lapu7g00280 402 Gene3D - 131 319 IPR027417 -
Lapu7g00280 402 ProSitePatterns Guanylate kinase-like signature. 170 187 IPR020590 -
Lapu7g00280 402 NCBIfam guanylate kinase 136 316 IPR017665 GO:0004385|GO:0006163
Lapu7g00280 402 PANTHER GUANYLATE KINASE-RELATED 48 365 - -
Lapu7g00280 402 SMART gk_7 134 320 IPR008145 -
Lapu7g00280 402 Pfam Guanylate kinase 135 316 IPR008145 -
Lapu7g00280 402 FunFam Guanylate kinase 1 167 226 - -
Lapu7g00280 402 ProSiteProfiles Guanylate kinase-like domain profile. 135 317 IPR008144 -
Lapu7g00280 402 FunFam Guanylate kinase 2 128 320 - -
Lapu7g00280 402 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 316 IPR027417 -
Lapu7g00280 402 SUPERFAMILY Galactose oxidase, central domain 24 112 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00280 Lapu-Chr7 3363983 3367614 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00280 K00942 - gmx:100812658 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00280 7 3363983 3367614 Lapu7g00280 7 3363983 3367614 ECH
Lapu1g00151 1 6954567 6958953 Lapu7g00280 7 3363983 3367614 PCT