Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00151 ATGGGAGAAGCACCAGCATTGCTTGTTGATGACCTGCAGGATGGGGCTCAGAGTGGCCATGAGTTGAAAAACGGAACTTGCAAAGCAACTGCTACCGTTGGTGATAAGACGTATGTCATTGGTGGAGCTGATGATGGAACTTTGTCTATTGAAGTTCAAATTTTTGACCGTAATCTTGGAGAATGGGTTCGTCCCACTGTGAGGGGTACCAAACCCGTGTCGTGCAAAGGCCTTTCAGCAGTGCCTTTGGAAGACAAAATATTAATTCTTAAGAAGGGTTCTAAGCCAGATGATCAAATATGGTTCCTGGAGGTTGACACCCTATATGTTAGGCAGCAGCAAGAATATTTGGGGACTGAGGTGGTTGCATGGAGTAAAGGTGTGGTAGGAAAAGCTGAGAAGCCTGTTGTTATTAGTGGTCCTTCTGGAGTAGGCAAAGGAACATTGATATCAATGCTTATGAAGGAGTTTCCATCTATGTTTGGTTTTTCTGTGAGCCACACCACCCGTGCTCCGAGAGGTATGGAGAAAGATGGGGTCCATTATCATTTTACTGAGAAGAGTATAATGGAGAAAGAAATCAAAGAGGGAAAGTTTCTCGAGTTTGCTTCTGTTCATGGTAATCTGTATGGAACTAGTGTTGAGGCTGTTGAACTGGTAGCAGATGCAGGGAAAAGATGTATTCTCGATATTGATGTTCAAGGTGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCGTATTCATCTTTATATGTCCCCCGTCAATGGAGGAGCTGGAGAAGCGCCTTCGTGACAGAGGGACGGAGACTGAGGAACAGATCCTGAAGCGACTGAGGAATGCCGAGGCTGAGATTGAGCAAGGCAAATCTTCTCACATATTTGATTTCATCCTGTACAATGACAAACTTGTTGAGTCTTACGATAGACTTAAGAAACTATTGGGACTTGATGATTTTGTCACTGCTCCTAAATCAGGTCCTGGAGAGATTGATCTACCAATTGACCATTCAGTGTCAAAAATTGATAACAAAATAATCATAAACCGAATCTCCTCAGGAGAGAAGGAATCAAAGAATTTGATCATATTAGATGTTTCCTCACTAAAAGGAGGTGCACCTGGACGGACAAGAGGCCTAAATTTTCAAGCCATTGGCTCGTTCTCAAATGGCTTGACTGAGATAGAGGAACTTAGCTAA 1197 0.4336 MGEAPALLVDDLQDGAQSGHELKNGTCKATATVGDKTYVIGGADDGTLSIEVQIFDRNLGEWVRPTVRGTKPVSCKGLSAVPLEDKILILKKGSKPDDQIWFLEVDTLYVRQQQEYLGTEVVAWSKGVVGKAEKPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRGMEKDGVHYHFTEKSIMEKEIKEGKFLEFASVHGNLYGTSVEAVELVADAGKRCILDIDVQGARSVRASSLEAVFIFICPPSMEELEKRLRDRGTETEEQILKRLRNAEAEIEQGKSSHIFDFILYNDKLVESYDRLKKLLGLDDFVTAPKSGPGEIDLPIDHSVSKIDNKIIINRISSGEKESKNLIILDVSSLKGGAPGRTRGLNFQAIGSFSNGLTEIEELS* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00151 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Lapu1g00151 398 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Lapu1g00151 398 SUPERFAMILY Galactose oxidase, central domain 29 112 IPR011043 -
Lapu1g00151 398 Gene3D - 128 318 IPR027417 -
Lapu1g00151 398 Coils Coil 271 291 - -
Lapu1g00151 398 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Lapu1g00151 398 FunFam Guanylate kinase 2 126 318 - -
Lapu1g00151 398 Gene3D - 15 126 IPR015915 GO:0005515
Lapu1g00151 398 SMART gk_7 132 318 IPR008145 -
Lapu1g00151 398 PANTHER GUANYLATE KINASE-RELATED 31 335 - -
Lapu1g00151 398 Pfam Guanylate kinase 133 314 IPR008145 -
Lapu1g00151 398 CDD GMPK 135 254 - -
Lapu1g00151 398 NCBIfam guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00151 Lapu-Chr1 6954567 6958953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00151 K00942 - gmx:100808931 717.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00151 1 6954567 6958953 Lapu1g00151 1 6954567 6958953 ECH
Lapu1g00151 1 6954567 6958953 Lapu7g00280 7 3363983 3367614 PCT