Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00259 ATGAGGACTTTCTTCACTGCAGAATCGTGTAAAGAAGCACACCCTAATGCTTTAAATCCACAATCCTGGCTCCAAGTTGAAAGAGGCAAGCTTCCAAAGTTGTCATCACAGCCCTCCTCTTCATCAATAGAATCTCTAATCAAGGTCCCACAGCCGCCTATACTCCCATTCTTCAAGCCTGTTGATTATGTGAAAGTTTTAGCTCAAATTCACGAAGAACTTGAGCTCTGCTCTCCGCCCGAGCAGTCAAATCTGTTTTTGTTACAGTACCAGGTCTTTAGGGGCATGAGGGATGTTAAACTGATGCGTAGAAGCCTCCGGTCAGCTTGGCTTAGAGCAAACACTGTTCATGAGAAGATTATATTTGGGGCATGGTTGAAGTATGAGAAGCAAGGGGAAGAATTAGTTGCTCAGTTGCTCACTACTTCTGGTAAATGTGAAAAGGATTTTGAACCCATAGATGTAGAATCTCATATTTCTTTTGATAAAGTTATAGTTTCCCAGGATAGAGTTTCCATGAATGGAAACCACGCTTCACAATATGTTATCTTTACAATCAGAGATGAGAAGATAGTCTGTGATAGACAAAAGATTTCTGAACTTTCAGCACCATTTCACGCAATGCTAAAGGGGTGTTTCAGGGAATCGCTTTCTGAGACCATCGATTTGTCTGAAAACGACATCTCTCCTTCAGGAATGAGGGCAATAAGCTATTTTAGCTTGACAGGAGGTTTACTTAATGTCCCTCAAAATCTTTTGTTGGAGATATCAGTTTTTGCAAACAAGTATTGTTGCGAAACACTAAAAATGGCTTGTGATAGAAGACTTGCATCCTTAGTTTCCTCCAGAGAGGATGCACTGGAACTCATGGAATATGCTGTTGACCAGAATTCATCTGTCCTTGCGGCTTCTTGTTTACAAATTCTTTTACGCGATATTCCCAACTGCTTGAGTGACAATCGGGTTGTGGAGTTATTTATTCATGCTAATAGGAAGGAGTTGGAAGTCATGGTTGGGCCTGGTATATTTGCACTTTTCTGTTTCTTAAGCGAAGTTTCTATGAACCTTAGTTCTAGTTCAGACACAACAGCTCATTTCCTGGAACGGTTGGTTGATTTTGCTGAAAATGACAAGCAGAGACTGCTGGCATTTCATGAATTGGGATGTGTAAGGCTCTCAAGGAAAGAATATGATGAAGCCTATGCTCTTTTTGAGAGGGCTGCAAATGCAGGCCATATTTATTCCGTTGCAGGTTTAGCTAGACTGGACTCTATAAAGGGTGAGAAGCTTTTACCTTATCAGAAGATAAGCTCAGTCATTTCTTCTGGTACTCCACTTGGATGGATGTACCAGGAAAGATCACTATACTGTGACGGTGATTTGAGGTGGAAAGACCTTGAGAAAGCAACTGAAGTGGACCCGACTCTTGTATACCCGTACATGTATAGGTCTGCCACTTTGATGAGGACACAGAATGTTCAAGGTGCATTGTCTGAAATCAACCGGATTCTTGGCTTCAAACTTTCATTAGAGTGCTTGGAACTACGGTTTTTCATCTATCTGGCCCTTGAGGACTACAAAGCAGCACTCCGAGATGTTCAAGCAATTCTTACCCTGTCTCCATCTTATAAAATGTTTGAAGGGCGTGTAGCTGCATCTCAGCTCTGTACTCTTGTGCGTGAGCATGTTGAACATTGGACAACTGCAGATTGTTGGGCACGATTATATGACTGTTGGTCTGCTGTTGATGATGTTGAGTCTCTTTCTGTCATCTACCAGATGCTTGAATCTGATGCGGCCAAAGGTGTTCTATACTTCAGACAGTCGTTGCTTCTTCTCAGGCTAGGCTGTGCTGAGGCAGCCATGAGGAGTTTACAGTTAGCATGGGAACATGCATCAAGTGAGCATGAAAGACTTGTTTATGAGGGGTGGATCTTGTATGATTCTGGACATTACGAGGAAGGGCTCCAAAAAGCTGAAGAGTCTATTACTATTAAAAGGTCTTTTGAGGCCTACTTTCTAAAAGCATATGCGTTGGCTGACTCTAGTGTAGATTCATCATGTTCTTCAACTGTCATCTCACTTCTGGAAGATGCCTTGAAGTGTCCTTCGGATAATCTGCGCAAAGGTCAGGCTCTGAACAATCTTGGAAGTGTTTATGTGGATTGCGGGAAACTAGACGCAGCAGAAGATTGCTATATCAAGGCCCTTAAAATCCAGCACACGCGAGCCCATCAGGGTCTTGCTCGTGTTCATTTTCTCAGAAATGATAAGGCTTCTGCTTTGAAGGAAATGACTAATCTTATTGAGAGGGCAAGAAACAATGCTTCAGCTTATGAGAAGAGGTCTGAGTATGGTGATCGTGAGCTCACAAAGGCTGATCTGGAGATGGTCACTAGATTAGACCCACTTCGGGTGTATCCTTATAGATATCGAGCAGCAGTTTTGATGGACAACCACAAGGAAGAGGAAGCCATTGCTGAACTCTCCAGAGCAATTGCATTTAAAGCTGATTTGCACCTCTTGCATCTGCGTGCAGCATTCCATGAACACAAGGGAGATGTCTTGAGTGCATTAAGAGATTGTCGTGCTGCACTCTCTGTGGACCCAAATCATCAAAAAATGTTGGAACTTCACTGTCGTGTTAATAGTCACGAGCCATGA 2664 0.4272 MRTFFTAESCKEAHPNALNPQSWLQVERGKLPKLSSQPSSSSIESLIKVPQPPILPFFKPVDYVKVLAQIHEELELCSPPEQSNLFLLQYQVFRGMRDVKLMRRSLRSAWLRANTVHEKIIFGAWLKYEKQGEELVAQLLTTSGKCEKDFEPIDVESHISFDKVIVSQDRVSMNGNHASQYVIFTIRDEKIVCDRQKISELSAPFHAMLKGCFRESLSETIDLSENDISPSGMRAISYFSLTGGLLNVPQNLLLEISVFANKYCCETLKMACDRRLASLVSSREDALELMEYAVDQNSSVLAASCLQILLRDIPNCLSDNRVVELFIHANRKELEVMVGPGIFALFCFLSEVSMNLSSSSDTTAHFLERLVDFAENDKQRLLAFHELGCVRLSRKEYDEAYALFERAANAGHIYSVAGLARLDSIKGEKLLPYQKISSVISSGTPLGWMYQERSLYCDGDLRWKDLEKATEVDPTLVYPYMYRSATLMRTQNVQGALSEINRILGFKLSLECLELRFFIYLALEDYKAALRDVQAILTLSPSYKMFEGRVAASQLCTLVREHVEHWTTADCWARLYDCWSAVDDVESLSVIYQMLESDAAKGVLYFRQSLLLLRLGCAEAAMRSLQLAWEHASSEHERLVYEGWILYDSGHYEEGLQKAEESITIKRSFEAYFLKAYALADSSVDSSCSSTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDAAEDCYIKALKIQHTRAHQGLARVHFLRNDKASALKEMTNLIERARNNASAYEKRSEYGDRELTKADLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKGDVLSALRDCRAALSVDPNHQKMLELHCRVNSHEP* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00259 887 ProSiteProfiles TPR repeat profile. 710 743 IPR019734 GO:0005515
Lapu7g00259 887 Gene3D Tetratricopeptide repeat domain 783 885 IPR011990 GO:0005515
Lapu7g00259 887 Pfam Tetratricopeptide repeat 711 741 IPR001440 GO:0005515
Lapu7g00259 887 Gene3D Tetratricopeptide repeat domain 583 772 IPR011990 GO:0005515
Lapu7g00259 887 SUPERFAMILY TPR-like 382 739 IPR011990 GO:0005515
Lapu7g00259 887 SUPERFAMILY TPR-like 693 880 IPR011990 GO:0005515
Lapu7g00259 887 PANTHER ETO1-RELATED 1 886 IPR044631 GO:0010105
Lapu7g00259 887 Gene3D Tetratricopeptide repeat domain 361 547 IPR011990 GO:0005515
Lapu7g00259 887 SMART tpr_5 381 414 IPR019734 GO:0005515
Lapu7g00259 887 SMART tpr_5 636 669 IPR019734 GO:0005515
Lapu7g00259 887 SMART tpr_5 839 872 IPR019734 GO:0005515
Lapu7g00259 887 SMART tpr_5 710 743 IPR019734 GO:0005515
Lapu7g00259 887 SMART tpr_5 510 543 IPR019734 GO:0005515
Lapu7g00259 887 Coils Coil 755 782 - -
Lapu7g00259 887 Gene3D Potassium Channel Kv1.1; Chain A 176 319 IPR011333 -
Lapu7g00259 887 SUPERFAMILY POZ domain 182 276 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00259 Lapu-Chr7 2979838 2984925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00259 711 871 Glycosyltransferase AT3G04240 26.901 6.74e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00259 - - gmx:100785039 1556.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02127 1 35344059 35355189 Lapu7g00259 7 2979838 2984925 PCT