Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02127 ATGAGGAGTTTCTTCCCTGCAGAATCCTGTAAAGAGACGCACCCAAATGCTTTGAATCCTCAGTCTTGGCTTCAAATTGAAAGAGGGAAATTTCCCAAGTTGTCGTCACACCCTTCATCTGCCTCAATAGAATCTCTGGTCAAGGTCCCTCAGCCAGCTATAGTGCCTTTCTATAAGCCTGCTGATTATGTGGAAGTTTTAGCTCAAATCCATGAAGAGCTTGAGTCTTGTCCTCCGCAAGAGCGGTCGAATCTGTTTTTGTTACAATACCAGGTCTTTAGGGGCCTTGGGGAAGTTAAATTGATGCGTAGAAGCCTTCAGGGAGCCTGGCAGAGAGCCAACACTGTTCATGAAAAGATTATATTTGGGGCATGGTTGAAATATGAGAAGCAAGAGGAAGAACTAATAGCCGACTTGCTTGCCAATTGTGGTAAATGTGCGAAGGAGTTTGCGCCTGTAGATATAGCGTCTCATCTTCCATTTGATGTAAATGTAAGTTCTATTGGGAGAATGACCAATGAGAACCGCATTTCACAACATGTTACTTTTACGATTGGCGATGAAGAGATAGTTTGTGATAGACAACAAATTTCAGAACTTTCGGCACCATTTCATGCTATGCTAAAGGGGTATTTCAGCGAATCATGCTCCGAGACTATAGATTTGTCTGAAAATAATATCTCTACTTTAGGTATGAAGGCAATAAGTAATTTCAGTTTGACTGGCAGTTTAATTGAGGTCCCTCCAAATCTTTTATTGGAGATATTAGTTTTTGCAAATAAGTATTGTTGTGAAAGACTTAAAGATGCTTGCGATAGAAAACTGGCATCCTTGGTCTCCTCCAAGGAAGATGCTGTAGAGCTCATGGAATATGCTCTTGATGAGAATTCCACTGTCCTTGCTGCGTCCTGTTTACAAGTCCTTTTGCGTGATCTTCCAAACTGTTTGAATGACAGTCGGGTGGTGGAGATATTTGTTCATGCTAATAAGCAGCAGCTAGCAGTCATGGTTGGGCCAGGTATATTTGCACTTTTCTGTTTCTTAAGTGAAGTTTCTATGAGCCTTAATTCTTGTGCAGACAAAACAGTTCATATCCTGGAACGGTTAGTCGAGTTTGCTGAGAATGACAAACAGAGACTACTGGCTTTACATCAATTGGGATGTGTAAGACTCTTAAGGAAAGAATATGATGAAGCAAGGCTTCTTTTTGAAGGGGCCGTAAATGCAGGCCATATATATTCTGTGGCAGGTTTAGCTAGACTGGACTTTATAAAGGGTGACAAGCTTTTATCTTTTGAGCGGTTCAGCTCAGTCATTTCATCTGTTACTCCACTTGGATGGATGTATCAGGAAAGGTCATTATACTGTAACAGTGACAATAGGTGGGATGACCTTGAGAAAGCAAGTAATTTGGATCCCACACTTGCATATCCTTACATGTACAGGGCTGCTTCTTTAATGAGGACGCAGAATGCTCATGCTGCACTAGCAGAAATCAATCGAATTCTTGGGTTCAAACTTTCACTAGAATGCTTAGAAATACGATTTTTTATCCATCTGACTCTTGAGGACTACAAGGCAGCTCTATGTGATGTTCAAACAATTCTTACATTACGCTCAGATTATAGAATGTTTGAGGGACGTGTTGCTGCATCCCAACTCTGCACTCTTGTGCGTGAGCATGTTGAACGTTGGACAACTGCTGATTGTTGGGCACGGTTATATGACTGTTGGTCAGCAGTTGATGATATTGGGTCTCTGTCTGTTATATACCAGATGCTTGAATCTGATGCGGCAAAAGGTATTCTGTACTTCAGACAGTCATTGCTTCTCCTAAGGTTGAACTGTCCTGAGGCTGCTATGCGGAGTTTACAGTTAGCTCGGCAACATGCATCAAGCGAGCACGAACGACTTGTATATGAGGGCTGGATCTTATATGATACAGGTCATTATGAGGAAGGGCTCCGGAAAGCAGAAGAATCTATTAGTATCAAAAGATCTTTTGAGGCCTTTTTCCTGAAGGCCTATGCATTGGCTGACTCTAGTATAGATCCATCATGTTCACCGACTGTTATCTCACTTCTAGAAGATGCCTTGAAGTGTCCTTCGGATAATCTGCGCAAAGGTCAGGCTCTGAACAATCTTGGAAGTGTCTATGTTGACTGCGGTAAATTGGACTTGGCTGCTGATTGTTATATCAATGCCCTTAAAATCCGACACACCCGAGCTCACCATGGTCTTGCTCGTGTTCATTGCCTAAAAAATGACAAGGCCGCTGCTTATATGGAAATGACCGAACTTATCAAGAAGGCTAAAAACAATGCATCGGCTTATGAGAAGAGGTCTGAGTATTGTGATCGTGAACAAGCAAAGGAAGATCTGGAGATGGTCACTAGATTAGATCCACTTCGGGTGTATCCTTACAGATATCGTGCTGCAGTATTGATGGATAACCACAAGGAAGAGGAAGCCATAGCCGAACTCTCTAGAGCAATTGCATTTAAAGCTGATTTGCACCTCTTGCATCTACGTGCAGCATTTCATGAACACAAAGAAGACGTCTTAGGTGCTCTAAGAGATTGTCGCGCTGCCCTCTCAGTGGACCCAAACCACCAAGAAATGTTGGAACTTCATAGTCGAGTCAATAGACACGAGCCATGA 2661 0.4243 MRSFFPAESCKETHPNALNPQSWLQIERGKFPKLSSHPSSASIESLVKVPQPAIVPFYKPADYVEVLAQIHEELESCPPQERSNLFLLQYQVFRGLGEVKLMRRSLQGAWQRANTVHEKIIFGAWLKYEKQEEELIADLLANCGKCAKEFAPVDIASHLPFDVNVSSIGRMTNENRISQHVTFTIGDEEIVCDRQQISELSAPFHAMLKGYFSESCSETIDLSENNISTLGMKAISNFSLTGSLIEVPPNLLLEILVFANKYCCERLKDACDRKLASLVSSKEDAVELMEYALDENSTVLAASCLQVLLRDLPNCLNDSRVVEIFVHANKQQLAVMVGPGIFALFCFLSEVSMSLNSCADKTVHILERLVEFAENDKQRLLALHQLGCVRLLRKEYDEARLLFEGAVNAGHIYSVAGLARLDFIKGDKLLSFERFSSVISSVTPLGWMYQERSLYCNSDNRWDDLEKASNLDPTLAYPYMYRAASLMRTQNAHAALAEINRILGFKLSLECLEIRFFIHLTLEDYKAALCDVQTILTLRSDYRMFEGRVAASQLCTLVREHVERWTTADCWARLYDCWSAVDDIGSLSVIYQMLESDAAKGILYFRQSLLLLRLNCPEAAMRSLQLARQHASSEHERLVYEGWILYDTGHYEEGLRKAEESISIKRSFEAFFLKAYALADSSIDPSCSPTVISLLEDALKCPSDNLRKGQALNNLGSVYVDCGKLDLAADCYINALKIRHTRAHHGLARVHCLKNDKAAAYMEMTELIKKAKNNASAYEKRSEYCDREQAKEDLEMVTRLDPLRVYPYRYRAAVLMDNHKEEEAIAELSRAIAFKADLHLLHLRAAFHEHKEDVLGALRDCRAALSVDPNHQEMLELHSRVNRHEP* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02127 886 Gene3D Tetratricopeptide repeat domain 785 884 IPR011990 GO:0005515
Lapu1g02127 886 SMART tpr_5 601 634 IPR019734 GO:0005515
Lapu1g02127 886 SMART tpr_5 635 668 IPR019734 GO:0005515
Lapu1g02127 886 SMART tpr_5 709 742 IPR019734 GO:0005515
Lapu1g02127 886 SMART tpr_5 838 871 IPR019734 GO:0005515
Lapu1g02127 886 Coils Coil 363 383 - -
Lapu1g02127 886 SUPERFAMILY TPR-like 460 779 IPR011990 GO:0005515
Lapu1g02127 886 Coils Coil 761 781 - -
Lapu1g02127 886 SUPERFAMILY POZ domain 175 276 IPR011333 -
Lapu1g02127 886 Gene3D Tetratricopeptide repeat domain 357 546 IPR011990 GO:0005515
Lapu1g02127 886 Gene3D Potassium Channel Kv1.1; Chain A 167 319 IPR011333 -
Lapu1g02127 886 PANTHER ETO1-RELATED 1 885 IPR044631 GO:0010105
Lapu1g02127 886 SUPERFAMILY TPR-like 361 503 IPR011990 GO:0005515
Lapu1g02127 886 SUPERFAMILY TPR-like 692 877 IPR011990 GO:0005515
Lapu1g02127 886 Gene3D Tetratricopeptide repeat domain 597 784 IPR011990 GO:0005515
Lapu1g02127 886 ProSiteProfiles TPR repeat profile. 709 742 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02127 Lapu-Chr1 35344059 35355189 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02127 - - gmx:100793740 1649.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02127 1 35344059 35355189 Lapu7g00259 7 2979838 2984925 PCT