Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00256 ATGGAACCCAAGTTCACAATGAATTGTGGCCGAAACGAGTTCCTCAAAACCAGAACTGGTTCGCATTTGCCAGAGAGCCCAAGAGTACCAATGGAGTTTCTGTCAAGATCATGGAGTGCCTCTGCTCTGGAGGTCTCCAAGGCCCTTGCACCTCCACCACCTCCTTCGTCTTACATACCTTCCAAGCCTCCTATTATACCCTCTTGTGTCTCCAACTCCATTTCCGAAGAAACTTCTTCTGCTAAGTCAGAGGAATTCTCAGCAACCATGTGTGGCAACCAGTTCTCTTTTGCTTCCTCCGCTACTTCACAGCTCGTCCTTGACCGCATTATGTCACAGTCAACTAGAGAGGAAGTGTCTCCATTAACGTCAGGTAGACTGTCTCACAGCAGTGAACCTTTGAACGGTGGTGCTTCTTTAACCGGGACGGACAGTCCACCAATCTCTCCTTCTGACGAGTTTGACGATGTAGTCAAGTTTTTTAGGGCAAACAACTCCATTCATCCCTTGTTCAATGGTGGACGAGCCATGAGTGGTGCTACAGGCAATGCCACTCCATGCTCCGGACCTAAAACAGTTGGAAGATGGTTGAAAGACAGAAGAGAAAAGAAGAAAGAAGAAAACAGGACCCATAATGCTCAACTTCATGCTGCAATTTCTGTTGCCGCCGTAGCAGCTGCAGTTGCTGCTGTCACTGCCGCAACGGCAGCCACATCAGCAGCTACCAAGGATGAGAAGATGGCCTTGTCTGTGGCTTCTGCGGCCACTTTAGTTGCTGCTCAGTGTGTAGAGGCCGCTGAAGCAATGGGAGCTGAGAGAGATCACCTTGCTTCTGTGATTAGCTCTGCTGTCAATGTCCGTTCTCATGATGACATCACAACACTTACAGCTGCTGCTGCCACAGCTCTACGTGGGGCAGCAACCTTGAAAGCAAGAACATTGAAGGAGGTGTGGAATATCAATGCAGTGACTCCATTAGAGAAAGGCGTAGGTATTGGAATATGTGCTAAAAGCAACAACAGTAATTCTAGCAACAGTGATAGTGGGGAGATTATGAATGGTGACAATTTTTTGGGTGCCTGCAACCAAGAGCTCCTTGCTAGGGGCACTGCATTGCTCAAACGGACCCGCAAAGGTGATCTTCACTGGAAAATAGTGTCAGTTTATATACATCGAACAGGCCAGGTAATGCTGAAAATGAAGAGCAGACACGTTGCGGGAACTATTACCAAAAAGAAAAAGAATGTTGTGTTAGATGTGTGCACAAATTTAGCAGCGTGGCCAGGACGGCATCTGTTTAATGAGGGTGAAGAAAGAAGGTATTTTGGATTGAAGACAGAAGCAAGAGGAATTGTGGAGTTTGAATGTAGAAATCAAAGAGAATATGATATTTGGACTCAAGGGGTTTCTAGACTTCTTTCCATAGTTGCACGCAGACAAAACATAAATGGGGTTTGA 1458 0.4657 MEPKFTMNCGRNEFLKTRTGSHLPESPRVPMEFLSRSWSASALEVSKALAPPPPPSSYIPSKPPIIPSCVSNSISEETSSAKSEEFSATMCGNQFSFASSATSQLVLDRIMSQSTREEVSPLTSGRLSHSSEPLNGGASLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRAMSGATGNATPCSGPKTVGRWLKDRREKKKEENRTHNAQLHAAISVAAVAAAVAAVTAATAATSAATKDEKMALSVASAATLVAAQCVEAAEAMGAERDHLASVISSAVNVRSHDDITTLTAAAATALRGAATLKARTLKEVWNINAVTPLEKGVGIGICAKSNNSNSSNSDSGEIMNGDNFLGACNQELLARGTALLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDVCTNLAAWPGRHLFNEGEERRYFGLKTEARGIVEFECRNQREYDIWTQGVSRLLSIVARRQNINGV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00256 485 MobiDBLite consensus disorder prediction 116 151 - -
Lapu7g00256 485 Pfam Auxin canalisation 24 329 IPR008546 -
Lapu7g00256 485 Pfam Plant pleckstrin homology-like region 372 476 IPR013666 -
Lapu7g00256 485 PANTHER EXPRESSED PROTEIN 19 477 IPR040269 -
Lapu7g00256 485 MobiDBLite consensus disorder prediction 116 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00256 Lapu-Chr7 2953969 2958225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00256 - - gmx:100782024 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00256 7 2953969 2958225 Lapu7g00256 7 2953969 2958225 ECH
Lapu1g02129 1 35380141 35384022 Lapu7g00256 7 2953969 2958225 PCT