Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02129 ATGGAGCCAAAGTGCACCATAAACTGTCGCCGGTCGGAGTTCGTTCCGACCCCTCTGCCGGAGAGTCCTCGAGTGCCCATGGAGTTTCTGTCACGCTCATGGAGTGCCTCTGCTCTTGAGGTCTCCAAAGCTCTTTCACATCACCACTCATCTCTCTCCTCTTCTTGCATGCCTAATTCAAACACCACCTCCATTCCTGAAGAAACAGTTCCCAACAGCAGCAGCAACAACAACTTTCTCTCTGAAGAGTTCTCCACCATGTCTAAGAATCAGTTCTCTTTTGCTTCCTCTGCCACCTCTCAGCTTGTCCTTGAACGCATTATGTCACAGTCCGCAAGAGAGGAAGTGTCTCCGTTAACGTCGGGTAGATTATCTCACAGCAGCGAGCCTTTGAATGGCGGTGGTTCCTTAACCGGAACAGATAGTCCTCCGATTTCACCTTCAGATGAGTTTGATGACGTTGTTAAGTTTTTTCGGGCAAATAATTCCATTCACCCTTTATTCAATGGTGGACGAGCCAGCGCAACTATTGGCAATGGCACCGCATGCTCAGGACCTAAAACTGTTGGAAGATGGTTAAAGGACAGAAGAGAAAAGAAGAAAGAAGAAAACAGAACCCATACTGCTCAGCTGCATGCCACTATTTCAGTGGCTGCAGTGGCTGCTGCCGTTGCAGCTATTGCGGCTGCAACAGCAGGCTCGTCTGCTCCCAGCAAGGATGAGAAGATGGCAAAGACTGACATGGCTGTTGCTTCTGCAGCCACTTTAGTTGCTGCACAGTGTGTAGAGGCTGCAGAAGCTATGGGGGCCGAGCGTGATCACCTTGCTTCTGTGGTCAGTTCTGCTGTGAATGTCCGTTCTCATGATGATATTACTACTCTTACAGCTGCAGCTGCCACAGCTCTACGAGGAGCGGCAACCTTGAAAGCAAGAGCTTTGAAGGAGGTATGGAATATAGCCACAGTGACACCACTAGAGCGAGGCATAGGGGGGATTGGACTGTGTGGTAAAAGTATTAACAGCAATACTAGCAACACCAGCACCAGTGATAGTGGGGAAGTTTTCAATGGAGAAAATTTTCTAGGTGCCTGCAGCCAAGAGCTAATTGCTAAGGGCAGTGAATTACTCAAGCGCACCCGTAAAGGTGATCTTCACTGGAAAATAGTGTCTGTCTATATACATCGAACCGGCCAGGTAATGCTGAAAATGAAGAGCAGACATGTGGCAGGAACCATTACCAAAAAGAAAAAGAATGTTGTGCTAGATATTTGCACGGATTTACCAGCATGGCCAGGGAGACATCTGTTTGATGATGGAGAAAAGAGACGGTACTTTGGATTGAAGACAGACCAAAGGGGGATTGTGGAGTTTGAGTGTCGAAATCAAAGAGAATATGACATCTGGACACAAGGGGTTTCGAGGCTACTCTCCATTGTAGCACAAAGACAAAACAGATATGGGAATTGA 1467 0.4772 MEPKCTINCRRSEFVPTPLPESPRVPMEFLSRSWSASALEVSKALSHHHSSLSSSCMPNSNTTSIPEETVPNSSSNNNFLSEEFSTMSKNQFSFASSATSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRASATIGNGTACSGPKTVGRWLKDRREKKKEENRTHTAQLHATISVAAVAAAVAAIAAATAGSSAPSKDEKMAKTDMAVASAATLVAAQCVEAAEAMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARALKEVWNIATVTPLERGIGGIGLCGKSINSNTSNTSTSDSGEVFNGENFLGACSQELIAKGSELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNVVLDICTDLPAWPGRHLFDDGEKRRYFGLKTDQRGIVEFECRNQREYDIWTQGVSRLLSIVAQRQNRYGN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02129 488 MobiDBLite consensus disorder prediction 114 149 - -
Lapu1g02129 488 MobiDBLite consensus disorder prediction 114 145 - -
Lapu1g02129 488 Pfam Plant pleckstrin homology-like region 374 479 IPR013666 -
Lapu1g02129 488 Pfam Auxin canalisation 20 327 IPR008546 -
Lapu1g02129 488 PANTHER EXPRESSED PROTEIN 16 480 IPR040269 -
Lapu1g02129 488 MobiDBLite consensus disorder prediction 50 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02129 Lapu-Chr1 35380141 35384022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02129 - - gmx:100805743 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02129 1 35380141 35384022 Lapu1g02129 1 35380141 35384022 ECH
Lapu1g02129 1 35380141 35384022 Lapu7g00256 7 2953969 2958225 PCT