Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00247 ATGGCTTTTAGGGGGCTTGTCTTGTGTCTAGTTACGGTTATGGTGGTGTGGACTCAAAATGCTACTGCCCAATCAGGTTGCACCAATACACTCACTAGCTTGAGCCCTTGCCTGAACTACATAATGGGAAGTTCTTCAACCCCGTCAGCTTCATGTTGCTCACAGCTCTCAAGCGTTGTCCAATCTTCACCACAGTGCCTTTGCTCCGTGCTTAATGGTGGTTCCACTTTTGGAATTACCATTAATCAAACTCTTGCTTTGTCTCTCCCTGGCGCTTGTAAAGTGCAAACTCCCCCAGTTAGCCAGTGCCAAGCTGGCAGTGGACCAACATCTCCTTCGACTGCTCCAGTTGGTTCTCCTTCTGATTCTTCAGCTGAATCACCTCAAGGGTCCATTACACCTGCTTCAGACTTTCCCTCAGGTGCAGGATCTAAAACGGTGCCATCAACAGATGGTGGTTCATCTGATGGAAACGCTATTGAAGTCCCCTCCCACATGGTGTTCTATCTTCTTGCCATTGTATCTTGTGTCTTAACCTTCACCAAGTTCTGA 552 0.4783 MAFRGLVLCLVTVMVVWTQNATAQSGCTNTLTSLSPCLNYIMGSSSTPSASCCSQLSSVVQSSPQCLCSVLNGGSTFGITINQTLALSLPGACKVQTPPVSQCQAGSGPTSPSTAPVGSPSDSSAESPQGSITPASDFPSGAGSKTVPSTDGGSSDGNAIEVPSHMVFYLLAIVSCVLTFTKF* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00247 183 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 26 104 IPR036312 -
Lapu7g00247 183 PRINTS Plant phospholipid transfer protein signature 26 42 IPR000528 GO:0006869|GO:0008289
Lapu7g00247 183 PRINTS Plant phospholipid transfer protein signature 80 97 IPR000528 GO:0006869|GO:0008289
Lapu7g00247 183 PRINTS Plant phospholipid transfer protein signature 47 61 IPR000528 GO:0006869|GO:0008289
Lapu7g00247 183 Pfam Probable lipid transfer 13 103 IPR016140 -
Lapu7g00247 183 CDD AAI_LTSS 34 95 - -
Lapu7g00247 183 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 24 102 - -
Lapu7g00247 183 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 10 155 IPR043325 -
Lapu7g00247 183 Gene3D - 24 103 IPR036312 -
Lapu7g00247 183 MobiDBLite consensus disorder prediction 103 157 - -
Lapu7g00247 183 SMART aai_6 27 103 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00247 Lapu-Chr7 2816679 2817626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00247 5 173 Lipid Metabolism Gene Families AT3G22600 49.711 4.94e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00247 - - gmx:100306151 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00247 7 2816679 2817626 Lapu7g00247 7 2816679 2817626 ECH
Lapu7g00247 7 2816679 2817626 Lapu1g02137 1 35510345 35512476 PCT