Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02137 ATGGCACTTAGAAGGATTGAGATGCTGCTGAGCCTGTCCCTTGTGGTGGCTCTTTGGGGTGCCACATTGGCTCAATCTCAATCAAGTTGCACCAATGTGTTCATTAGTCTTGCTCCCTGCCTTGATTATGTAACAGGAAATTCCTCTATCCCTTCATCTTCTTGCTGCTCTCAACTTGCCTATGTGGTGAGTTCACAGCCCCTGTGCCTCTGTGAGGTTGTTAACGGTGGTGCTTCATCTATTGCTGCAAGTTTCAACATCAATCAGACTCGGGCTTTGGCTCTCCCCACTTCTTGCAACGTTCAGACACCTCCTCTTAGCACCTGCAGTGGTTCCGCTTCTTCCTCACCAGGACTCTCTGTTTCAAACTTTCCCAACTCCCCTCTAGGAATTGGATCTAACACTGTTTCATCAACGACTGGAGGTAGTAGAAGTGTGGGTGATTCATCTCATGGAAATTCAAGTTCCACTACTAAATTATCATGTTCTTGGTTTGTCATGTTTGTCCTTGCAACCACTTTGACTTTCACCTTCAAGAGTACGACCTAG 549 0.4645 MALRRIEMLLSLSLVVALWGATLAQSQSSCTNVFISLAPCLDYVTGNSSIPSSSCCSQLAYVVSSQPLCLCEVVNGGASSIAASFNINQTRALALPTSCNVQTPPLSTCSGSASSSPGLSVSNFPNSPLGIGSNTVSSTTGGSRSVGDSSHGNSSSTTKLSCSWFVMFVLATTLTFTFKSTT* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02137 182 Gene3D - 27 107 IPR036312 -
Lapu1g02137 182 MobiDBLite consensus disorder prediction 135 157 - -
Lapu1g02137 182 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 15 154 IPR043325 -
Lapu1g02137 182 Pfam Probable lipid transfer 15 109 IPR016140 -
Lapu1g02137 182 SMART aai_6 30 109 IPR016140 -
Lapu1g02137 182 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 29 111 IPR036312 -
Lapu1g02137 182 CDD AAI_LTSS 37 101 - -
Lapu1g02137 182 PRINTS Plant phospholipid transfer protein signature 29 45 IPR000528 GO:0006869|GO:0008289
Lapu1g02137 182 PRINTS Plant phospholipid transfer protein signature 50 64 IPR000528 GO:0006869|GO:0008289
Lapu1g02137 182 PRINTS Plant phospholipid transfer protein signature 86 103 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02137 Lapu-Chr1 35510345 35512476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02137 5 150 Lipid Metabolism Gene Families AT3G22600 47.403 2.65e-35 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02137 - - gmx:100789510 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02137 1 35510345 35512476 Lapu1g02137 1 35510345 35512476 ECH
Lapu7g00247 7 2816679 2817626 Lapu1g02137 1 35510345 35512476 PCT