Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00199 ATGGGAGGTGGTGGCCGAAGCTCTGCTCCAAAACGGAGAAACTCAGGTGAAGAAGAGGTTTCGAAAAAGCGCGTCCCACACGCAAAACCACCGTTCAGTCTGAGCCAAGTGAAGAAAGCGATTCCGCCGCACTGTTTCCAGCGTTCGGTGGTTCGTTCCTTCTCCTATGTCTTCTACGACCTTGCCATAGCCTCATGTCTCGTCTACGTGGCGCTAAATTACTTCTCTACCCTTCCCCACAACCTCTCCCTCTTGGCCTGGCCCCTCTACTGGATCATCCAAGGTTCCGTCCTCACCGGCGTCTGGGTCATCGCGCACGAGTGTGGCCACCACGCTTTCAGCGATTACCAATGGCTCGATGACTCGGTTGGTCTCGTTCTCCACTCGTTTCTTCTGGTGCCCTACTTTTCGTGGAAATACAGCCACCGCCGCCACCACTCCAACACGGGGTCCCTTGAACGTGACGAAGTGTTTGTGCCGAAAACAAAGTCCAGCATTCGTTGGTATTCCAAGTACCTCAACAACCCTCTTGGGAGAGTTATGACTCTTGGTATTACCCTAACCCTAGGTTGGCCTCTCTACTTAGCCTTCAACGTTTCGGGTAGGCACTACGAGCGTTTCGCGTGCCACTATGACCCTTACGGCCCCATTTACTCAGACCGTGAAAGGCTTCAGATTTATGTCTCCGATGCTGGGATTCTAGCCGTGTGTTATGGCCTCTACAAGCTTGTCCTGGCCAAAGGGTTGGTTTGGGTGGTTTCTGTTTATGGGGTGCCTTTGATGGTGGTAAATGGGTTCTTGGTGTTGATCACTTTCTTGCAGCACACTCACCCTGCGGTTCCTCACTACGATTCCTCCGAGTGGGATTGGTTCAGAGGCGCATTAGCCACTGTGGACAGAGATTACGGGATTCTGAACAAGGTTCTTCATAACATCACTGACACACACGTGGCGCATCACTTGTTCTCCACCATGCCTCATTACCATGCAATGGAAGCCACCAAGGCCATAAAACCGATTTTGGGAGAGTATTATCACTTTGATGGCACTCCTATCTATAAGGCAATGTGGAGAGAAGCAAGAGAGTGTATGTATGTTGAGACTGATGAAGGGTCCAAGGACAAAGGTGTTTACTGGTACAACAATAAGCTGGAATGA 1158 0.5095 MGGGGRSSAPKRRNSGEEEVSKKRVPHAKPPFSLSQVKKAIPPHCFQRSVVRSFSYVFYDLAIASCLVYVALNYFSTLPHNLSLLAWPLYWIIQGSVLTGVWVIAHECGHHAFSDYQWLDDSVGLVLHSFLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKTKSSIRWYSKYLNNPLGRVMTLGITLTLGWPLYLAFNVSGRHYERFACHYDPYGPIYSDRERLQIYVSDAGILAVCYGLYKLVLAKGLVWVVSVYGVPLMVVNGFLVLITFLQHTHPAVPHYDSSEWDWFRGALATVDRDYGILNKVLHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYHFDGTPIYKAMWREARECMYVETDEGSKDKGVYWYNNKLE* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00199 385 CDD Delta12-FADS-like 48 330 - -
Lapu7g00199 385 MobiDBLite consensus disorder prediction 1 29 - -
Lapu7g00199 385 Pfam Fatty acid desaturase 86 346 IPR005804 GO:0006629
Lapu7g00199 385 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 17 383 IPR012171 GO:0016491
Lapu7g00199 385 MobiDBLite consensus disorder prediction 11 26 - -
Lapu7g00199 385 Pfam Domain of unknown function (DUF3474) 16 66 IPR021863 GO:0016717
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00199 Lapu-Chr7 2204679 2207675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00199 1 384 Lipid Metabolism Gene Families AT3G12120 74.479 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00199 K10256 - gmx:100780912 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00199 7 2204679 2207675 Lapu7g00199 7 2204679 2207675 ECH
Lapu1g00090 1 5578359 5579510 Lapu7g00199 7 2204679 2207675 PCT