Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00090 ATGGGGGCTGGTGGCCGAACCTTTGTCCCTCCCGCCAACAGGAAATCAGAGGCCGACCCTCTGAAGCGGGTGCCATTTGAAAAACCTCATTTTAGTCTCAGCCAGATCAAGAAGGCCATCCCACCTCACTGTTTCCAGCGCTCTGTTCTCCGCTCATTCTCCTATGTCATTTATGACCTCACCATAGCCTTCTGCCTCTATTATGTTGCCACCCATTACTTTCACATCCTTCCCCGTCCTCTCTCTTTCCTTGCATGGCCAATCTACTGGGCTGTCCAAGGCTGTATCCTCACCGGCGTTTGGGTCATTGCCCATGAGTGTGGCCACCATGCATTCAGTGACTACCAGCTGCTTGATGATATCGTTGGCCTTGTTCTCCATTCTGCTCTCCTAGTCCCATACTTTTCATGGAAATACAGTCATCGCCGTCATCACTCCAACACTGGTTCTCTTGAGCGGGATGAAGTATTTGTGCCAAAGCAGAAGTCCGGTATGAAGGGGTACTCTAAATACCTTAACAATCCACCAGGCAGAGTCCTCACACTTGTCGTCACCCTCACTCTTGGTTGGCCAATGTACTTGGCTTTTAATGTTTCAGGCAGGCCTTATGAAAGGTTTGCTTGCCACTATGATCCTTATGGTCCCATTTACACTGATCGTGAACGACTCCAAATATATGTATCAGATGCTGGAATACTTGCAGTATGCTATGGCCTTTTCCATCTTGTCATGGCAAAAGGGCTTGCCTGGGTGGTGTGTGTTTATGGAGTTCCGTTGCTAGTGGTCAATGGATTTCTGGTGTTGATTACATTCTTGCAGCATACTCACCCTGCATTGCCGCACTACAATTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTGGCGACAGTTGACAGAGATTATGGAATTCTGAACAAGGTCTTCCATAATATTACAGACACTCATGTAGCACATCACTTGTTCTCCACAATGCCGCATTATCATGCAATGGAGGCTACGAAAGCAATAAAGCCCATTTTGGGAGAGTATTATCGGTTGGACGAGACTCCATTTGTCAAGGCAATGTGGAGAGAGGCAAGAGAGTGTATTTATGTGGAGCCAGATCACGATACTGAGAACAAAGGTGTATTTTGGTACAACAAGAAGTTGTGA 1152 0.4731 MGAGGRTFVPPANRKSEADPLKRVPFEKPHFSLSQIKKAIPPHCFQRSVLRSFSYVIYDLTIAFCLYYVATHYFHILPRPLSFLAWPIYWAVQGCILTGVWVIAHECGHHAFSDYQLLDDIVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSGMKGYSKYLNNPPGRVLTLVVTLTLGWPMYLAFNVSGRPYERFACHYDPYGPIYTDRERLQIYVSDAGILAVCYGLFHLVMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYNSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKAIKPILGEYYRLDETPFVKAMWREARECIYVEPDHDTENKGVFWYNKKL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00090 383 CDD Delta12-FADS-like 47 329 - -
Lapu1g00090 383 Pfam Domain of unknown function (DUF3474) 28 66 IPR021863 GO:0016717
Lapu1g00090 383 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 15 381 IPR012171 GO:0016491
Lapu1g00090 383 Pfam Fatty acid desaturase 85 345 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00090 Lapu-Chr1 5578359 5579510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00090 1 383 Lipid Metabolism Gene Families AT3G12120 75.718 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00090 K10256 - gmx:100805040 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00090 1 5578359 5579510 Lapu1g00090 1 5578359 5579510 ECH
Lapu1g00090 1 5578359 5579510 Lapu7g00199 7 2204679 2207675 PCT