Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00171 ATGGAGTTGCCTACAACTAATGCGGATCTTGGCCCTAAGAAGATTGAACATGAGAAAGAGGAAGGTCCCTTGTTGCATTGTGATTTTTGTGACACAGAAGTAGTTCACAAGTTGGCTCAAATGTTCATGCCAGGACTAGCCTCTGCCTGTGTTGATAGCACAACAGGGGATCCCTTCAAGACCCCTGGTTCTGTGGCTGTTGATTTGAGAAAGGAGATGATAGAATTCGTCACTCAAAAGAGTGAATTATTTGTTGCTGAGTCTATTATCTCTGAGGGTGGTCCTGATTGTGAATCGTTGGAACTCCCTTTTGATATCATTTCTTTTTTTGTTGACGAGTTTGTTAATTCAAAGAGGAATTTGTTGAGTCAGTTTTCAGAGTGGTTGCTAAGTGATAAGAGAGAGGACAAAATAGATGATTTTATTCAGGAGATGGAAATAAATGGTTTTTGGCCACTGGATAGAAGAGAAACACTTGCGAAAGATTTGCTCAAGAATGTTGACTTCAAGAGCTCATTTCATTGCAGTATGAGTTTTAAATCTGGAGAAGATCTTGCCAACCATGTTGATGCTTGCAACTTCAGGCCTGTGATATGCCAAAATGATGGGTGCAATGTTAGATGCAGTGCTGGTCAATTGAAAGAGCATGATTCAACTTGTGATTTCAAGATAGTTCCATGTGAACAAAAGTGCACACATAGCATGTTGAGACGTGAGATGGATAGACACTGCATTACAGTTTGTCCAATGAAGCTTGTGAATTGCCCTTTCTCTGCCATAGGTTGTAGATCTACAATTGCACAAAGTATGATTAGAAAACATTGTTCAGATGATATTGAGTCTCACTTATTGCTAATGCTCAGAGGCATCCACCAGCAAGCATCAGGCGAAGATCTTCAAAGACGTCTGGCGCAAATTGTACAGACATCATCAAGAAGCAAATTAGCGGAGGCTAAGGATGCGAGATCCTTTAAAAATATTGTTAAGGACCTTGAAGCTAAGCTAGGGTCTTTGGAAGTTAGTGCCAAAGAGAAAACTAATGCAGAAGAAGTTGCCAAAAATGAAGATCAGGAAGACAATAGAACCAAAACAAAGGACTAG 1101 0.4015 MELPTTNADLGPKKIEHEKEEGPLLHCDFCDTEVVHKLAQMFMPGLASACVDSTTGDPFKTPGSVAVDLRKEMIEFVTQKSELFVAESIISEGGPDCESLELPFDIISFFVDEFVNSKRNLLSQFSEWLLSDKREDKIDDFIQEMEINGFWPLDRRETLAKDLLKNVDFKSSFHCSMSFKSGEDLANHVDACNFRPVICQNDGCNVRCSAGQLKEHDSTCDFKIVPCEQKCTHSMLRREMDRHCITVCPMKLVNCPFSAIGCRSTIAQSMIRKHCSDDIESHLLLMLRGIHQQASGEDLQRRLAQIVQTSSRSKLAEAKDARSFKNIVKDLEAKLGSLEVSAKEKTNAEEVAKNEDQEDNRTKTKD* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00171 366 Coils Coil 328 348 - -
Lapu7g00171 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 215 280 IPR013083 -
Lapu7g00171 366 MobiDBLite consensus disorder prediction 342 366 - -
Lapu7g00171 366 SUPERFAMILY TRAF domain-like 203 275 - -
Lapu7g00171 366 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 24 343 - -
Lapu7g00171 366 Pfam TRAF-type zinc finger 216 274 IPR001293 GO:0008270
Lapu7g00171 366 ProSiteProfiles Zinc finger TRAF-type profile. 216 263 IPR001293 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00171 Lapu-Chr7 1809078 1814734 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00171 - - vra:106769987 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00171 7 1809078 1814734 Lapu7g00171 7 1809078 1814734 ECH
Lapu6g00743 6 7804516 7805660 Lapu7g00171 7 1809078 1814734 PCT