Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00157 ATGGAGAATGAGAACACAAAGGATAAGGTGTTTGAGAAGTTCACATGGACGATTAAGGACTTCTCCAAATTGGACTCCTATGAACTATACTCTCAGAAATTTTCCCTTGATGACCATTTATGGCGGATTCTGATTTTTCCAAAGGGAAACAATGTGGATTACTTGTCAATTTATTTAGATGGTGGTGGGAATGTTGAAAATCTGAGTGAGGGATGGAACAAATTTGCAAATTTCAAGTTGGCTTTAGTTAATCAGATCAACCACAACATGACTAAAGCAAGAGAAACTGAACACCAATTCAATGCAAAAGAGAGTTGTTGGGGTTTCACACGATTCATACCTTTAGATGAACTTTGTAACCCTAGCAATGGGTTTATAGTGAATGATACTTGCATAATTGAAGTTGAGATTTTGGTCAACAAGTTAAAACGCGAGAATCAAGTAGATCAAGGAGACAAGAAGATCAACGATGAACCTACCAAACATATTGATAAACCTTTACCTATAGAAATGTTCACAACATTTGTTGACCTAGTGGACTTTAAGGGCTTAGGGAAAATAGAAGAAGAATTTTTTTCACTATTAGAAGAAGTATGTTCACAACATCCTTCACTTATTAATAGTCAAAAGAAGAGAACTCTTAGATATGTTGAATGGGCATTCACAGCTTTAGGTAGAGTTCTGAATTTTCTTAAGACTAAAAAGGTGAAAGATATGGATGAAGATGCATGTGATCATCTCCAAGTTTTATGGGAGGAACTTGAGACATTCAAATTTGATTTGACTTGGTTGCAACCCCATGTTCAATCAGCCTTGGGTATGAAAAATTATATGGAAAGAACTCTTCAAGTGAAAAAAATGAAGGAGAAGTTGTCTACTTTAGAGATGGAAAGAAAGATGCTCAAGGAAAAAATGAGAGAAACAAATGTAAATCTTGAAATAACAAGAAGAGAATTAGCA 960 0.349 MENENTKDKVFEKFTWTIKDFSKLDSYELYSQKFSLDDHLWRILIFPKGNNVDYLSIYLDGGGNVENLSEGWNKFANFKLALVNQINHNMTKARETEHQFNAKESCWGFTRFIPLDELCNPSNGFIVNDTCIIEVEILVNKLKRENQVDQGDKKINDEPTKHIDKPLPIEMFTTFVDLVDFKGLGKIEEEFFSLLEEVCSQHPSLINSQKKRTLRYVEWAFTALGRVLNFLKTKKVKDMDEDACDHLQVLWEELETFKFDLTWLQPHVQSALGMKNYMERTLQVKKMKEKLSTLEMERKMLKEKMRETNVNLEITRRELA 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00157 320 Coils Coil 284 320 - -
Lapu7g00157 320 ProSiteProfiles MATH/TRAF domain profile. 11 137 IPR002083 GO:0005515
Lapu7g00157 320 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 154 IPR008974 GO:0005515
Lapu7g00157 320 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 309 - -
Lapu7g00157 320 SMART math_3 13 118 IPR002083 GO:0005515
Lapu7g00157 320 SUPERFAMILY TRAF domain-like 13 141 - -
Lapu7g00157 320 Pfam MATH domain 18 138 IPR002083 GO:0005515
Lapu7g00157 320 CDD MATH 13 137 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00157 Lapu-Chr7 1723396 1726016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00157 - - gmx:121172949 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00741 6 7782029 7792849 Lapu7g00157 7 1723396 1726016 ECH
Lapu7g00157 7 1723396 1726016 Lapu7g00157 7 1723396 1726016 ECH
Lapu6g00741 6 7782029 7792849 Lapu7g00157 7 1723396 1726016 PCT