Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00116 ATGTCGGGGAAGGAGTGCGACCACCACAAGGGAAAGAAGAGGAGAATCTTCCGGCAAGTGTTCTGGTGCATAGTGGTGTTCCTCTTCGTCGTGTTGGTCACTATTCTTCTCATATGGGCCATCCTTAGACCAACCAAACCTACCTTCACTCTCCAAGACGTCACCGTTTACGCCTTCAACGCCACCGTTCCCAACTTCTTGACATCGAATTTCCAAGTCACGCTTATCTCCCGCAACCCTAACGACCACATCGGAGTCTACTACGACCGTCTCGAAACCTACGTCACTTACCGGAGCCAGCAGGTCACCTACCGCACCGCCATTCCTCCCACCTATCAGGGCCACAAAGAGGTCAACGTTTGGTCGCCGTTTGTCTACGGCGTCAACATCCCCGTCGCTCCCTTCAACTTCGTCGGCCTCAGCGAGGACCAGGCTGCAGGTAACGTCCTCATCACCATCAAAGCCGACGGCAGGGTCCGGTGGAAGGTCGGCGCCTTCATCTCCGGCCGCTACCACCTCTACGTCCGCTGCCCCGCCTTCATCTCCTTCGGCTCACGCAGCAACGGTATCGTCGTCGGCGAAAACGCCATCAAGTTTCAGATCATCCAACGGTGCTCCGTCAGCGTTTAA 630 0.5619 MSGKECDHHKGKKRRIFRQVFWCIVVFLFVVLVTILLIWAILRPTKPTFTLQDVTVYAFNATVPNFLTSNFQVTLISRNPNDHIGVYYDRLETYVTYRSQQVTYRTAIPPTYQGHKEVNVWSPFVYGVNIPVAPFNFVGLSEDQAAGNVLITIKADGRVRWKVGAFISGRYHLYVRCPAFISFGSRSNGIVVGENAIKFQIIQRCSVSV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00116 209 PANTHER OS05G0367900 PROTEIN 19 206 IPR044839 GO:0098542
Lapu7g00116 209 Pfam Late embryogenesis abundant protein 77 177 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00116 Lapu-Chr7 1243667 1245212 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00116 - - gmx:100788592 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00116 7 1243667 1245212 Lapu7g00116 7 1243667 1245212 ECH
Lapu6g00696 6 7287568 7288715 Lapu7g00116 7 1243667 1245212 PCT