Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00696 ATGTCGGTGAAGCAGTGCCACCACCACAAGGGAAAGAAGCACAAGCTCTTCAAACGCATATTCTGGGGCATAGTCATCTTCGCTTTCATCGTGTTGCTCACAGTTCTGATAATCTGGGCGATTCTGAAGCCCACAAAGCCAACCTTCATCCTCCAAGACGTCACCGTGTTCGGCTTCAACGCCACCATCCCCAACCTCCTCACCTCAAGCTTTCAGGTGACGCTGTCCTCGCGCAACCCCAACGACAAAATCGGCATCTATTACGACCGTCTCAGCGCCTACGTCACCTACAGGAATCAGCAAGTCACGTACCGAACCTCGATCCCTCCCTCCTACCAAGGTCACAAGGAAGAAGACGTGTGGTCCCCATTCGTCTACGGCACCAACGTCCCCGTCGCACCCTACAACTTCCTTGGCCTCAGTCAAGATCAGTCCAACGGCAACGTCCTCGTCATCGTTAAAATTGACGGTAAAGTCCGATGGAAGGTCGGTGCCTTTATCTCTGGCCACTACAACCTCTATGTAAGGTGCCCTGCTTTCATAACCTTTGGCCCTCGAAGCACCGGGATTGCTCTTAGCAATAACGCCGTTAAGTATCAACTGGTTCAGCGCTGCACCGTCGGGGTTTGA 630 0.5302 MSVKQCHHHKGKKHKLFKRIFWGIVIFAFIVLLTVLIIWAILKPTKPTFILQDVTVFGFNATIPNLLTSSFQVTLSSRNPNDKIGIYYDRLSAYVTYRNQQVTYRTSIPPSYQGHKEEDVWSPFVYGTNVPVAPYNFLGLSQDQSNGNVLVIVKIDGKVRWKVGAFISGHYNLYVRCPAFITFGPRSTGIALSNNAVKYQLVQRCTVGV* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00696 209 Pfam Late embryogenesis abundant protein 74 177 IPR004864 -
Lapu6g00696 209 PANTHER OS05G0367900 PROTEIN 18 196 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00696 Lapu-Chr6 7287568 7288715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00696 13 177 EF-hand Containing Proteins AT5G21130 21.387 9.53e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00696 - - gmx:100795832 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00696 6 7287568 7288715 Lapu6g00696 6 7287568 7288715 ECH
Lapu6g00696 6 7287568 7288715 Lapu7g00116 7 1243667 1245212 PCT