Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02327 ATGGAGCCACCCGCAGCGAAAAACGGCTCGTTGCGGAACGTTCTGGTTCGTCTCTTCTCCTTCGCCGTACTCATCTTCGCCGCGCGATTCGCCATCATCGTCACCGTCCGCGGAGGATCCTGCGACTCCACCGATTTCTGCTTCTTCTCCGAAAACCTCAATCTATCCTCCCCCTCCCGCTACTCTGACGCCGGAGATCCATTTACCGGCAAGAACTGGCGCCGCTCCGTCGAGTACTACGCCGCTGTTTTCCAGGACCTCATTGCCGACGGCTTCCTCTCCCCGAACTCCCGCGCCCTCTGCATAGACACGCCCGCCGGCGAGGACGTCCTCTCGCTGAAAGAGGTCGGCGTCGTCGACTCCGTCGGAATCTTCAAGAAACCGTCGCCGCCGCTGATCCTCCACGGTGACGGCCGCCGGCATCCGTTCTCAGCTGACTCATTCGACTTCGAGTTCTCCGGAAACGGCGGCTTGGAACGTTCCTCTCGCCCGGCGGAGTTCGCCGCGGAGATCTGCCGCACGCTTCGTCCCGGCGGTTTCGCGGCGGTGCACGCGGCAGTTAGAGACGCTTACAGCTTCGATTCTTTCCTTGAATTGTTTAATTGCTGTGAATTGATCAGAACTCGAGAAATCAACGGTGTTGATTCCTCTCCTGTTCTTGAAATTTTGTTGAAGAAGAAAAAGAAAGATCCTAATTTCGAAATGGAAACTCCAGAGAGTGACGATGTCGTGAATAAGTGCTCGGTTCCTGGTTATAAGCGTGAAATAGTTAAAAATGCAGAGGCATTGATTGAGGAAGAGCCATTGAAACCTTGGATTATATTAAAGAAAAATGTGAAGAACGTGAAGTACTTAACTTCTTTGGTTGACATAAGCTTTAAGAATAGGTATGTATATGTTGATGTAGGAGCTAGGAGTTATGGTTCTAGCATAGGAAGTTGGTTTAGGAAACAGTATCCAAAGCAGAATAGAACCTTCGAGATTTATGCAATTGAGGCTGATAAATCATTTCATGAAGAGTATAGGGAAAAGGGAGGAGTGACATTGTTGCCCTATGCAGCTTGGGTGAGGAATGAGACATTGTTCTTTGAGATCACCAGAGACCCAAGCAAGAAGGTGGAGGTGAAAGGGAGAGGCATGGGGAGGATCAACCCTGTGCAAACCTCTTCCAGCCATATGGGTGACATGGATAAAATCCAGGGTTTTGATTTTGCAGAGTGGCTCAAGAGTGCTGTTACAAAAAGAGATTTTGTGGTGGTAAAGATGGATGTGGAAGGGACTGAGTTTCATCTCATCCCAAGGTTGATTCAGACTGGGGCTCTCTGCTTGATTGATGAGCTCTTCCTTGAGTGCCATTACAATAGGTGGCAGAGATGCTGCCCTGGTCAGAGAAGTGCAAAATATCACAAGACCTATTCTCAATGCTTGAATCTGTTTACATCACTTAGAAGTTATGGTGTTCTAGTACATCAATGGTGGTGA 1482 0.4926 MEPPAAKNGSLRNVLVRLFSFAVLIFAARFAIIVTVRGGSCDSTDFCFFSENLNLSSPSRYSDAGDPFTGKNWRRSVEYYAAVFQDLIADGFLSPNSRALCIDTPAGEDVLSLKEVGVVDSVGIFKKPSPPLILHGDGRRHPFSADSFDFEFSGNGGLERSSRPAEFAAEICRTLRPGGFAAVHAAVRDAYSFDSFLELFNCCELIRTREINGVDSSPVLEILLKKKKKDPNFEMETPESDDVVNKCSVPGYKREIVKNAEALIEEEPLKPWIILKKNVKNVKYLTSLVDISFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNRTFEIYAIEADKSFHEEYREKGGVTLLPYAAWVRNETLFFEITRDPSKKVEVKGRGMGRINPVQTSSSHMGDMDKIQGFDFAEWLKSAVTKRDFVVVKMDVEGTEFHLIPRLIQTGALCLIDELFLECHYNRWQRCCPGQRSAKYHKTYSQCLNLFTSLRSYGVLVHQWW* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02327 493 Pfam Methyltransferase domain 133 182 IPR013216 GO:0008168
Lapu6g02327 493 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 283 452 IPR029063 -
Lapu6g02327 493 Gene3D Vaccinia Virus protein VP39 280 458 IPR029063 -
Lapu6g02327 493 Gene3D Vaccinia Virus protein VP39 117 216 IPR029063 -
Lapu6g02327 493 PANTHER METHYLTRANSFERASE 1 493 - -
Lapu6g02327 493 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 134 194 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02327 Lapu-Chr6 22807315 22808796 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02327 - - gmx:100788611 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02327 6 22807315 22808796 Lapu6g02327 6 22807315 22808796 ECH
Lapu6g02327 6 22807315 22808796 Lapu10g01297 10 17657055 17659079 PCT