Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g01297 ATGGAGCCTACCGCAGGGAAGCCCGGGTTTCTCAGAAACGTTCTCATACGGTTACTCCTCTTCGGCCTATTCATTGTCATCGTACGGTTCGCTTACGTCATCACCGTCGCCGGCGAGTCCTGCACCGTCGGCGACTTCTGCTTCTTCTCCCCGTCGCTGAATCTCGCCATTGCCGGAACCAGATCAGGCGCTCTCGCCCTCCGCGCCGCCTCCGGCGGCGCGGCGGCGCCCGAGCGCTACGCTAGCAAGGACTGGATCAGCGGCGTTCGGTTCTACTCGTCGGTATTCCAGAACCTCATCGCCGGCGGCTTCCTCTCGTCGACGGCGAAGTCGCTCTGCCTGGAGACGGCGACCGGCCGCGACGTCCTTGCGCTGCGCGAGATCGGCGTTACGGACGCCATCGGTATTTCGAAGAAGGCGTCGCCGCCGCTGGTGAAGTCTGGAGAGGGTCACCGGATTCCGTTCGCGAACGGCACATTCGACTTCGTGTTCGCCGGTGATGGTGCGCTAGAGGGATCGCTGCGGCCGGCGGAGTTCGCGGCGGAAATTGCTCGGACGCTCAAACCCGAAGGGTTTGCAGCGTTCCATGTAAAGGCCAATGACACTTACAGTTTTAATTCATTCGTTGATTTGTTCAATTTTTGTTGCAATGTGGTGAAAGTAAACGACATATTAGGGTTTGATTCATCGATGTCACACGTAAGAGAACTCGTCGTGAAGAAAAAGCGTTATGGAATTGGTTCCGATTCCAATTCCAACTCCAATGGCAAATGCTCTGTTCCAGAGTACAAGAAAAAGTTGGTTAGAAACGCTGAGGCATTAATTGAAGAGGAGCCACTGAAGCCATGGATCACTCTGAAGAGAAACGTGAAGAACATAAGGTACCTATCCTCAATGGTTGATATAAGCTTTAAGGATAGGTATGTGTACGTTGATGTTGGAGCTAGAAGCTATGGTTCCAGTATTGGAAGTTGGTTTAGGAAACAGTACCCGAAACAGAACAAGACCTTTCATGTGTATGCCATTGAGGCTGACAAAACGTTTCATCAGGAGTATGGTTTGAAAAAAGGGGTTACTCTGTTGCCTTATGCTGCATGGGTTAGGAATGAAAGTTTGGTGTTTGAGATTAACCGTGGCCCTGGGGAGAAGGTTGAGGGTAAGGGCAGGGGCATGGGGAGGATTCAACCATTGCAGTCTTCTGGTGGTTTTGATGGTGGTGAGGTTGAGAAGATTCCCGGGTTTGATTTTGCTGACTGGTTGAAGAACACGGTTTCGAAGAACGATTTTGTTGTGATGAAGATGGATGTGGAGGGTACTGAGTTTGATTTGATTCCAAGGTTGTTTGAAACTGGGGCTATATGTTTGGTGGATGAGATTTTTCTTGAGTGCCATTACAATAGGTGGCAGAGGTGTTGCCCGGGACAGAGGAGTCCCAAGTATGAGAAAACGTATGATCAGTGCTTGCAGCTCTTCACTTCTCTCAGACAGAGTGGAGTTCTTGTACATCAATGGTTTTAA 1518 0.5079 MEPTAGKPGFLRNVLIRLLLFGLFIVIVRFAYVITVAGESCTVGDFCFFSPSLNLAIAGTRSGALALRAASGGAAAPERYASKDWISGVRFYSSVFQNLIAGGFLSSTAKSLCLETATGRDVLALREIGVTDAIGISKKASPPLVKSGEGHRIPFANGTFDFVFAGDGALEGSLRPAEFAAEIARTLKPEGFAAFHVKANDTYSFNSFVDLFNFCCNVVKVNDILGFDSSMSHVRELVVKKKRYGIGSDSNSNSNGKCSVPEYKKKLVRNAEALIEEEPLKPWITLKRNVKNIRYLSSMVDISFKDRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYGLKKGVTLLPYAAWVRNESLVFEINRGPGEKVEGKGRGMGRIQPLQSSGGFDGGEVEKIPGFDFADWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLQLFTSLRQSGVLVHQWF* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g01297 505 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 294 447 IPR029063 -
Lapu10g01297 505 PANTHER METHYLTRANSFERASE 1 505 - -
Lapu10g01297 505 Gene3D Vaccinia Virus protein VP39 293 469 IPR029063 -
Lapu10g01297 505 Pfam Methyltransferase domain 146 195 IPR013216 GO:0008168
Lapu10g01297 505 Gene3D Vaccinia Virus protein VP39 118 256 IPR029063 -
Lapu10g01297 505 Pfam Methyltransferase FkbM domain 312 471 IPR006342 -
Lapu10g01297 505 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 205 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g01297 Lapu-Chr10 17657055 17659079 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g01297 - - gmx:100811015 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g02327 6 22807315 22808796 Lapu10g01297 10 17657055 17659079 PCT