Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g02113 ATGAACCTCTCTCATCTTTCCTCTGCTTCTCATAGAACGCAAAACATGGATAAAAAAACCACTGAACCAAGCGATTTTTCAAGCCCTCTTCTCCCCACAAGTTATGGTGCCCATGACGGTGACGTTGACTTTCTGGAAAAGAGGCACAATGGAGCTTCTTCCGTTCCAACTACTCTTATACTCACCACCCTCGTTGCTGTTTTTGGTTCCTACGTTTTTGGCTCGGCTATTGGGTATTCTTCACCTACTCAATCTGGAATCATGCGTGAACTCAATCTCGGAGTGGCCCAGTACTCAATTTTTGGTTCGATATTGACTATTGGAGCTATGATTGGTGCTGTTGTTAGTGGTAGAATAGCAGATTATGCAGGTCGTCGAGTTGCCATGGGGTTCTCCCAGATTTTCTGCATCTTGGGATGGTTTGCCATAACATTCTCAAAGACTGCTTGGTGGCTTTATGTTGGAAGACTGTTGATAGGATGTGGGATTGGCCTTCTATCTTATGCGGTACCTGTTTATGTAGCAGAAATAACACCCAAGAATCTTCGAGGGGCATTCACTGCAGTTCATCAGTTAATGATTAGTGTTGGGATGTCATTAACTTATCTTATTGGAGCATATGTCAATTGGAGGATCTTGGCTCTAATAGGAATTATTCCGTGCCTTGCGCAGCTTCTGAGTCTGCCCTTCATTCCTGATTCTCCCAGGTGGCTGGCCAAGGTCGGACGCATAAGAGAGAGTGATTCTGCTTTACAGCACCTCAGGGGTAAGAACGCTGATGTTTATCAAGAGGCCACTGAAATTAGAGATTACACCGAAGCCCTTCAGAAGCAAACAGAAGCTAGCATCATCGGCTTATTCCAAATGCAGTATTTGAAGTCACTTATCGTAGGAGTCGGCTTGATGATACTGCAACAGTTTGGAGGGATTAATGGCATCGTTTTTTATGCAAACTCTATATTTATAACTGCTGGGTTGTCAGAAAGTATTGGATCAGTAGCAATGGTTGCCATTAAGATTCCAATGACAACTTTAGGAGTACTTTTAATGGATAAATCTGGAAGAAGACCACTTCTGCTGGTATCTGCAGTGGGAACATGCTTAGGATGCTTCCTGGCAGCCTTGTCATTTGTCTTGCAGGACTTACATAAATGGAAGGAAGTTAGCCCCATTATGGCCTTAGTGGGTGTACTGGTATATGTGGGATCTTACTCTATAGGCATGGGAGCAATTCCGTGGGTTATAATGTCTGAGATATTTCCCATCAACGTGAAGGGCTCTGCTGGAAGCCTTGTGACTTTGGTTAGCTGGTTGTGTTCTTGGATTATATCATATGCTTTTAACTTCCTCATGAATTGGAGTTCAGCAGGAACCTTCTTCATGTTTTCTAGCATATGTGGCTTCACTGTGCTATTCGTAGCAAAACTCGTACCAGAGACCAAGGGGCGAACATTAGAAGAAATTCAAGCTTCTTTGAGTTCATATTCTTCGAAGAGATGA 1500 0.4333 MNLSHLSSASHRTQNMDKKTTEPSDFSSPLLPTSYGAHDGDVDFLEKRHNGASSVPTTLILTTLVAVFGSYVFGSAIGYSSPTQSGIMRELNLGVAQYSIFGSILTIGAMIGAVVSGRIADYAGRRVAMGFSQIFCILGWFAITFSKTAWWLYVGRLLIGCGIGLLSYAVPVYVAEITPKNLRGAFTAVHQLMISVGMSLTYLIGAYVNWRILALIGIIPCLAQLLSLPFIPDSPRWLAKVGRIRESDSALQHLRGKNADVYQEATEIRDYTEALQKQTEASIIGLFQMQYLKSLIVGVGLMILQQFGGINGIVFYANSIFITAGLSESIGSVAMVAIKIPMTTLGVLLMDKSGRRPLLLVSAVGTCLGCFLAALSFVLQDLHKWKEVSPIMALVGVLVYVGSYSIGMGAIPWVIMSEIFPINVKGSAGSLVTLVSWLCSWIISYAFNFLMNWSSAGTFFMFSSICGFTVLFVAKLVPETKGRTLEEIQASLSSYSSKR* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g02113 499 ProSiteProfiles Major facilitator superfamily (MFS) profile. 62 481 IPR020846 GO:0022857
Lapu6g02113 499 MobiDBLite consensus disorder prediction 1 31 - -
Lapu6g02113 499 Pfam Sugar (and other) transporter 63 490 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lapu6g02113 499 Gene3D MFS general substrate transporter like domains 51 494 IPR036259 -
Lapu6g02113 499 PANTHER - 57 489 - -
Lapu6g02113 499 ProSitePatterns Sugar transport proteins signature 1. 116 132 IPR005829 GO:0016020|GO:0022857|GO:0055085
Lapu6g02113 499 SUPERFAMILY MFS general substrate transporter 63 489 IPR036259 -
Lapu6g02113 499 CDD MFS_GLUT6_8_Class3_like 60 487 IPR044775 GO:0008643|GO:0051119
Lapu6g02113 499 PRINTS Sugar transporter signature 394 415 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu6g02113 499 PRINTS Sugar transporter signature 70 80 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu6g02113 499 PRINTS Sugar transporter signature 305 315 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu6g02113 499 PRINTS Sugar transporter signature 417 429 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu6g02113 499 PRINTS Sugar transporter signature 153 172 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu6g02113 499 NCBIfam sugar porter family MFS transporter 58 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Lapu6g02113 499 FunFam sugar transporter ERD6-like 6 53 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g02113 Lapu-Chr6 20816162 20820953 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g02113 24 492 Organic Solute Cotransporters AT5G18840 52.979 1.17e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g02113 K03444 - gmx:100817150 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02192 1 36490909 36504267 Lapu6g02113 6 20816162 20820953 ECH
Lapu6g02113 6 20816162 20820953 Lapu6g02113 6 20816162 20820953 ECH