Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01974 ATGGCGGGAGAAACATCTTGGATAAGCCACTATGATGACAGACAGAGGGAGACTGGAGTTTTTGATTCATTTTTAGAACTTGGTGAGGAAGGTGAGAAAGAAGCAACTGCTGTTTCTTTAGATGTCATTTTGCCCGATGACTTGTTGGAACGAATCCTAGCCTATCTACCCATTGCAAGCATTTTTAGAGCTGGTTGTGTGTCTAAGAGATGGCATGAGATTGTTAATTCAGAGAGATTTTTGTGGAACCTTTCACATGTTCTACCGCAGAAACCATGGTACTTTATGTTTACAAGCTCTGATGAACCAATTGGTTATGCTTTTGATCCCGTTCTTCGTAAATGGTATCACATTGAACTTCCATGCATTGGAACATCAAATTGGTTCATTGCATCATCATGTGGCATGGTCTGCTTCATGGACAATGACAGCAGAAGTGAATTATGTATCTGCAACCCAGTTACCAAAACCTACAGGAAGCTTGAGGAGCCTCCAGGTTTGAAATTTTCTGATTACAGTGCATTGGCAATCTCAGTGAATCGGGAATCTCACATTTATTCTGTGGCAATTGTAAAATCTAAACAAGTTCCCGAGAACTTTTTTCAGTGGGATATCTCAATTCATATATACAATTCAGTAAACACAACCTGGGTGACCACTTTAACCGAAGTTTTGATGGGGTGGAGAGGTGGTGACGAGAGTGTGATATGCAATGGGATGCTATACTTTTTAGTTTATTCAACTGGGGGTGGCCAATCGGAAAATCGCCATGCCCTAATTGCATATAACATGTCTAACCGTTCTTCCCAATGTAGCTTGACAAGGAGCTTTATTCCGGTACCTTGTTCTCTAACTTGTGGGCGACTGATGAATCTGAAGGAGAAACTTGTAATGGTGGGAGGAATTGGCAAACCAGATCGACCTGACATAATAAAGGGAATTGGTATCTGGCTTCTAAATGATAAGAGGTGGGAAGAAATTGCTCGAATGCCCCACAAATTCTTCCAAGGCTTTGGAGAGTTTGATGATGTTTTTGCTAGCAGTGGTGCAGATGATCTTATATATATTCAGAGTTATGGAGCGCCGGCGCTTCTCATATTTGACACGAACCATAAACAATGGAAATGGTCACAGAAGTGCCCTGTGGCAAAACGATTCCCGCTGCAGCTTTTTACGGGCTTTTGCTTTGAGCCTAGACTTGAAATAGCTCCATAG 1215 0.4181 MAGETSWISHYDDRQRETGVFDSFLELGEEGEKEATAVSLDVILPDDLLERILAYLPIASIFRAGCVSKRWHEIVNSERFLWNLSHVLPQKPWYFMFTSSDEPIGYAFDPVLRKWYHIELPCIGTSNWFIASSCGMVCFMDNDSRSELCICNPVTKTYRKLEEPPGLKFSDYSALAISVNRESHIYSVAIVKSKQVPENFFQWDISIHIYNSVNTTWVTTLTEVLMGWRGGDESVICNGMLYFLVYSTGGGQSENRHALIAYNMSNRSSQCSLTRSFIPVPCSLTCGRLMNLKEKLVMVGGIGKPDRPDIIKGIGIWLLNDKRWEEIARMPHKFFQGFGEFDDVFASSGADDLIYIQSYGAPALLIFDTNHKQWKWSQKCPVAKRFPLQLFTGFCFEPRLEIAP* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01974 404 FunFam F-box/kelch-repeat protein At3g61590 37 84 - -
Lapu6g01974 404 Gene3D - 89 391 IPR015915 GO:0005515
Lapu6g01974 404 Gene3D - 34 84 - -
Lapu6g01974 404 Pfam F-box-like 44 83 IPR001810 GO:0005515
Lapu6g01974 404 ProSiteProfiles F-box domain profile. 44 84 IPR001810 GO:0005515
Lapu6g01974 404 SUPERFAMILY Galactose oxidase, central domain 95 383 IPR011043 -
Lapu6g01974 404 PANTHER F-BOX FAMILY PROTEIN 32 401 IPR045048 -
Lapu6g01974 404 SMART fbox_2 44 84 IPR001810 GO:0005515
Lapu6g01974 404 FunFam F-box/kelch-repeat protein At3g61590 family 90 388 - -
Lapu6g01974 404 SUPERFAMILY F-box domain 42 143 IPR036047 GO:0005515
Lapu6g01974 404 CDD F-box_AtFBW1-like 44 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01974 Lapu-Chr6 19544870 19549055 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01974 - - gmx:100817678 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01974 6 19544870 19549055 Lapu10g00182 10 3671108 3674252 PCT