Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01959 ATGTTAGAGAAAGTGGAAGAGTTTAATATGGACAAAGTTATAGAAGAATTTGAGTTGTTGTCAAAGGATGCGGAAAGGGTTCAGAGGGAAACTCTGAAAAAGATTTTAGAAGATAACGCGTCAGCTGAGTATTTGCAGAGTTTGGGTCTCAGTGGAAGAACTGATCCGGAGAGTTTCAAGGCCTGTGTTCCACTGGTTACCCACCAAGAATTGGAACCTTACATATACAGAATTATTGATGGTGATGTTTCACCTATTCTCACTGGCAAGCCCATCACAACAATGTCTTTAAGTTCTGGAACTACCCAGGGGAAGCCAAAATATGTACCCTGGAACGATGAATTGTATGAAACCACAATGCAGATATACCAGACCTCTTTTGCCTTTAGAAACAGAGAGTTTCCGATAAAAAACGGGAAGGCTTTAAGCTTTATATACGGGAGCAAACAGTTCAAAACAAAGGGGGGTCTGGCAGCTAGAACTGCTACAAGCAATGTGTTCAGTAATGCTGGTTATAAGTGTGCAATGAGGGCACTCCAGTCCCAATGCTGCAGCCCGGATGAAGTGATATTTGGTCCTGATTTTTTCCAATCACTGTACTGCCATCTGTTGTGTGGTCTGATTTTCCGGGAGGAGGTTCAATTTGTATCTTCTACATTTGCTCATAGCATTGTCCATGCTTTTAGAACCTTTGAACAAGTGTGGGAAGAGCTATGTACTGATATTAGGGAAGGGGTTCTCACCAGCAGTGTCACCGTACCTTCCATTCGAATGGCCATGTCTAAACTGCTCAAGCCAAACCCGAAATTAGCCAACTTGATACACAAAAAATGTACGGGGTTGAGCAACTGGTACGGGTTGATACCAGAGCTTTTTCCCAATGCTAAGTATATTTATGGCATAATGACTGGGTCGATGGAGCCTTATTTGAAGAAGTTGAGGCACTATGCAGGGGAGCTTCCTTTGTTGACTGCTGACTATGGATCTTCTGAGGGATGGATAGCTGCAAATGTGAACCCACAACATCCCCCTGAGTATGCCACATATGCTGTGCTTCCTCACATCGGTTACTTTGAATTCATTCCTCTCTCAGAGCTTGACAATGCCAGGGGTGAGCCAGATTTCCTTTGTACTGATCCTCAGCCTGTGAGCCTGACTGAAGTCAAGGTTGGTGAAGAGTATGAAGTTGTTATGACCAATCCAGCAGGATTATACAGGTATAGATTGGGGGACGTGGTCAAGGTTATGGGATTCTACAATTCAACTCCAGAACTCAAGTTTATTCGGCGTAGCAGTCTTCTGCTCAACATTAACATTGACAAGAACACTGAGAAGGATTTACAGGTAGCTGTGGAAGCAGCTGCGAATTTGTTAGCAGGAGAAAAATTGGAAGTAGTTGATTTCAGTAGCCACGTTGATTTATCTGAAGAACCGGGACACTATGTCATCTTCTGGGAAATCAGTGGGGAAGCAAGTCAAGAACTACTCCACGAATGCTGTAACTGTTTAGACAAGTCTTTCGTTGATGCAGGCTACACCAGTTCTCGCAAAGTGAACTGCATCGGTGCCCTGGAACTACGAATTGTTCGGAGAGGAACATTCCAGAAGATTCTGGATCATTACCTAGGACTAGGAACCGCTGTTAGTCAGTACAAGACACCAAGATGTGTTGGTCCTACAAACGCCATGGTGTTGCAAATCTTGAGTGAAAATGTTGTGAATAACTATCTCAGTACTGCTTTCTAA 1746 0.4353 MLEKVEEFNMDKVIEEFELLSKDAERVQRETLKKILEDNASAEYLQSLGLSGRTDPESFKACVPLVTHQELEPYIYRIIDGDVSPILTGKPITTMSLSSGTTQGKPKYVPWNDELYETTMQIYQTSFAFRNREFPIKNGKALSFIYGSKQFKTKGGLAARTATSNVFSNAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCTDIREGVLTSSVTVPSIRMAMSKLLKPNPKLANLIHKKCTGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLRHYAGELPLLTADYGSSEGWIAANVNPQHPPEYATYAVLPHIGYFEFIPLSELDNARGEPDFLCTDPQPVSLTEVKVGEEYEVVMTNPAGLYRYRLGDVVKVMGFYNSTPELKFIRRSSLLLNINIDKNTEKDLQVAVEAAANLLAGEKLEVVDFSSHVDLSEEPGHYVIFWEISGEASQELLHECCNCLDKSFVDAGYTSSRKVNCIGALELRIVRRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNAMVLQILSENVVNNYLSTAF* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01959 581 Coils Coil 10 30 - -
Lapu6g01959 581 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 581 IPR004993 -
Lapu6g01959 581 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01959 Lapu-Chr6 19411554 19416462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01959 12 579 EF-hand Containing Proteins AT1G23160 38.422 1.59e-133 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01959 K14506 - gmx:100794598 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01959 6 19411554 19416462 Lapu10g00224 10 4197521 4202133 PCT