Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00224 ATGTTGGAGAAAGTGGAAGGATTTAACATGGAGAGAGTGATTGAGGAATTTGAGAGGGTGACAAAGGATGCTGGGAGGATTCAAGGGGAAACGCTGAAAAGGATTTTGGAAGATAACGCTTCTTCTGAGTACTTGTTGAATTTGGGCCTGAATGGGAGGAGTGACCCTGAGAGTTTCAAGGCCTTTGTTCCACTGGTCACTCACAAGGAATTGGAGCCTTATATCAATAGAATACTTGATGGTGATACTTCTCCTATTCTCACTGGCAAACCCATCACAACCATGTCTTTGAGCTCTGGCACCACTCAGGGAAAGCCAAAATTTGTTCCATGGAATGAGGAACTGTTTGACACCACATTGCAGATATATCACACCTCTTTTGCCTTCAGGAACAGGGAATTTCCCATAAACAATGGCAAGGCCTTGGGCTTTGTCTACAGCAGCAAGCAGTTTAAGACCGACGGGGGCGTGCTAGCAGGAACTGCCACAACCAATGTGTTTCGCAGCCCAGGGTTCAGGAATGCAATGAAGGCCATTCAGTCCCCATTTTGCAGCCCTGATGAAGTTATATTTGGTCCTGATTTTCACCAATCACTGTACTGCCACCTCTTGTGTGGGCTAATATTCAGAGAGGAAGTTCATATGGTGTCTTCCACATTTGCATACAGCATTGTGTCTGCTTTTAGGACCTTTGAGCAAGTGTGGGAGGAGCTTTGTGTTGATATCAAAGAAGGGGTGCTTAGCAGCAAGGTCACAGTTTCATCCATTAGGACAGCCATGTCTAAGCTGCTCAAACCTGACCCTGAGCTGGCCAACTTGATCCACAATAAGTGCATGGGGCTGAGCAACTGGTATGGCCTAATACCAGAGCTTTTCCCCAATGTTAAGTATGTTTATGGGATCATGACCGGGTCAATGGAACCTTATTTGAAGAAGTTGAGGCATTATGCTGGAGAGTTGCCTTTGTTGACTTCTGACTATGGATCTTCTGAAGGGTGGATAGGAACCAATGTCAAACCAAGAGTGCCACCTGAATTGGCCACTTACACTGTGCTTCCTCAAATTGGCTACTTTGAATTCATCCCTCTGAGAGAGCTGGAAGGAACCAAGGGAGATGCCAGTTTCCTATGTATGGATCCTGAGCCTGTGGGGCTCACTGATGTGAAGGTGGGTGAGGAGTATGAGATAGTCATCACCAATCCAGCAGGCTTGTACAGATACCGACTTGGCGATGTGGTGAAGGTGATGGGGTTCCATAACTCAGCTCCAGAAGTGAAGTTTGTTAGGCGCAGCAATCTTCTTCTGACCATCAACATTGACAAGAACACAGAGAAAGATTTGCAGTTAGCTGTGGAAGCAGCATCTCAATTGTTGGCAGAGGAGAAATTGGAAGTTGTAGACTACACGAGCCACGTAGATTTGTCCAAAGAGCCAGGCCATTATGTGATATTCTGGGAAATCAGTGGAGAAGCAAGTGAAGAAGTGCTTGGTGGATGCTGCAACTGTTTGGACAAGTCTTTTGTTGATGCTGGCTACACCAGTTCTCGCAAAGTCAACTGCATTGGGGCCCTTGAACTCCGAGTTTTGAGGAGAGGAACATTCCAGAAGATTCTTGAGCATTACGTGGCACTAGGATCTGCTGCAAATCAGTTCAAGACACCAAGATATGTAGGCCCTACAAACACCCAAGTGTTGCAAATATTGAATGAAAATGTTGTGAAGAACTATCTCAGTACTGCCTTCAATTGA 1749 0.458 MLEKVEGFNMERVIEEFERVTKDAGRIQGETLKRILEDNASSEYLLNLGLNGRSDPESFKAFVPLVTHKELEPYINRILDGDTSPILTGKPITTMSLSSGTTQGKPKFVPWNEELFDTTLQIYHTSFAFRNREFPINNGKALGFVYSSKQFKTDGGVLAGTATTNVFRSPGFRNAMKAIQSPFCSPDEVIFGPDFHQSLYCHLLCGLIFREEVHMVSSTFAYSIVSAFRTFEQVWEELCVDIKEGVLSSKVTVSSIRTAMSKLLKPDPELANLIHNKCMGLSNWYGLIPELFPNVKYVYGIMTGSMEPYLKKLRHYAGELPLLTSDYGSSEGWIGTNVKPRVPPELATYTVLPQIGYFEFIPLRELEGTKGDASFLCMDPEPVGLTDVKVGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSAPEVKFVRRSNLLLTINIDKNTEKDLQLAVEAASQLLAEEKLEVVDYTSHVDLSKEPGHYVIFWEISGEASEEVLGGCCNCLDKSFVDAGYTSSRKVNCIGALELRVLRRGTFQKILEHYVALGSAANQFKTPRYVGPTNTQVLQILNENVVKNYLSTAFN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00224 582 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 581 IPR004993 -
Lapu10g00224 582 Pfam GH3 auxin-responsive promoter 16 557 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00224 Lapu-Chr10 4197521 4202133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00224 17 579 EF-hand Containing Proteins AT1G23160 38.754 1.00e-135 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00224 K14506 - gmx:100813492 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00224 10 4197521 4202133 Lapu10g00224 10 4197521 4202133 ECH
Lapu6g01959 6 19411554 19416462 Lapu10g00224 10 4197521 4202133 PCT