Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01932 ATGTCTTCAGCCGGTGTCTCTACTCTTAGCTTGGTTCCCTCTGAGCCATTGTTGTCACCAAAGGCATTCCCTTTCCCATCCCACTTGTCTTTGGAAGATAAATCCATTTTCATATATCTCTCCTTTTCGGGTTCGTTGACTCCAATCCGTGTCATGGAGTGGGATACCATTGAGTCTGTGAAATTCAAAATCCAAAGGTGTGAAAGCCTTCCATTTTTAACAAACAAACAGAAGTTGGTTTATGCTGGCCGAGAACTCGCGCGGAGTGATTCTCTGCTCAAGGACTATGGAGTAACCGGTGGCAATGTTTTGCATTTGATAATCAAACTGTCAGATGTTCAGGTCATCAATGTGAAAACATCTTGTGGGAAGGAGTTCACGTTTCAGGTTGAAAGAGGTCGGGATGTTAGGTACGTAAAGCGGCGGATTGCCAAAAGAGAGAAACAGTTTGATGATCCTGAGGAGCAAGAGCTTGTGTGCAATGGAGAAAGGCTTGAGGACCAGAGGCTTATTGATGATATATGCTGCAAGCATAATGATGCTGTGGTACATCTGTTCGTGAGAAAAAAACATGTTAAAGTTCAGAGGAGACCCCTTGAGTTGTCCATTGTAGCAACAAATTTGATTGATAAGAAAGAAAACGATGTCAATGGAAAGACATTTAGGAGAAATTATGATGTTGGTAACGAAGATACTATTAGAAAGTCTGATGCCATTCAAAGAACTGTGCCTAGAAAGCCTCCCGAAAGAGATTTTATTTTCGAGCCAGTTATTATTAACCCTAAAATTGAATTAGCTCCAGCTATTTGGAATATGGTGAACTCTACATATGATGGACTTGACAGTGGAAAATATCCAATCAGATCTGCAGAGGGTACAGGAGGAGCTTACTTTATGCTTGATTCAGCGGGGCAAAAGTATGTGTCTGTTTTTAAGCCTATTGATGAAGAGCCAATGGCAGTGAATAACCCTCGAGGTCTTCCGTTGTCGTTAGATGGTGAAGGCTTAAAAAAGGGTACAAGAGTTGGTCAAGGTGCATTCAGGGAAGTTGCAGCATATGTTCTAGATCATCCATTGAGTGGGCGGCGCAAATTATTTGGTGACGTGACGGGCTTTGCTGGTGTCCCTCCAACATTGATGATTAAGTGTTTGCATAAAGCATTTAACTATCCTAGAGAATTGACTCCTAAGATTGGCTCCTTGCAAATGTTCACAGAAAATAGTGGAAGTTGTGAAGATATGGGCCCTGGGGCTTTCCCAGTAAAGGAAGTACATAAAATTACTGTTTTGGACATAAGACTGGCAAATGCAGATAGGCATGCTGGGAATATTTTGATCAGCAAAGAGGAAGACAACAACCAGTCTGTTCTGATTCCAATTGATCATGGATATTGCTTGCCTACAAGCTTTGAAGATTGTACCTTTGAGTGGCTTTACTGGCCCCAAGCTTGCCAGCCATATTCCCCAGAAACTATTGAGTACATAAAGTCACTGGATGCCGAAGAAGATATTGCCCTTTTAAAGTTTCATGGATGGGATCTGCCGGTTGAATGTGCTCGCACTCTTAGGATCTCAACCATGCTTTTGAAGAAAGGGGCAGAGAGAGGGTTGACCCCCTTTGCCATTGGAAGCATGATGTGCAGGGAATCCTTGAACAAGGAATCTGTGATTGAAGAAATACTACAAGCAGCACTTGATTCTGTTCTTCCTGGCACAAGTGAACCTACATTGTTGGATGCTGTTTCCCAAATCATGGATCTGCGCCTCGATGAGATTGTCAGGTCTCGTTTATAA 1794 0.4253 MSSAGVSTLSLVPSEPLLSPKAFPFPSHLSLEDKSIFIYLSFSGSLTPIRVMEWDTIESVKFKIQRCESLPFLTNKQKLVYAGRELARSDSLLKDYGVTGGNVLHLIIKLSDVQVINVKTSCGKEFTFQVERGRDVRYVKRRIAKREKQFDDPEEQELVCNGERLEDQRLIDDICCKHNDAVVHLFVRKKHVKVQRRPLELSIVATNLIDKKENDVNGKTFRRNYDVGNEDTIRKSDAIQRTVPRKPPERDFIFEPVIINPKIELAPAIWNMVNSTYDGLDSGKYPIRSAEGTGGAYFMLDSAGQKYVSVFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYVLDHPLSGRRKLFGDVTGFAGVPPTLMIKCLHKAFNYPRELTPKIGSLQMFTENSGSCEDMGPGAFPVKEVHKITVLDIRLANADRHAGNILISKEEDNNQSVLIPIDHGYCLPTSFEDCTFEWLYWPQACQPYSPETIEYIKSLDAEEDIALLKFHGWDLPVECARTLRISTMLLKKGAERGLTPFAIGSMMCRESLNKESVIEEILQAALDSVLPGTSEPTLLDAVSQIMDLRLDEIVRSRL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01932 597 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 46 565 IPR044571 -
Lapu6g01932 597 SUPERFAMILY Ubiquitin-like 110 189 IPR029071 -
Lapu6g01932 597 SMART ubq_7 114 188 IPR000626 GO:0005515
Lapu6g01932 597 SMART ubq_7 36 109 IPR000626 GO:0005515
Lapu6g01932 597 ProSiteProfiles Ubiquitin domain profile. 116 173 IPR000626 GO:0005515
Lapu6g01932 597 ProSiteProfiles Ubiquitin domain profile. 34 109 IPR000626 GO:0005515
Lapu6g01932 597 Gene3D - 113 196 - -
Lapu6g01932 597 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 283 576 IPR000403 -
Lapu6g01932 597 Pfam Ubiquitin family 116 189 IPR000626 GO:0005515
Lapu6g01932 597 Pfam Ubiquitin family 38 110 IPR000626 GO:0005515
Lapu6g01932 597 SUPERFAMILY Protein kinase-like (PK-like) 432 592 IPR011009 -
Lapu6g01932 597 CDD Ubl_ubiquitin_like 116 186 - -
Lapu6g01932 597 SUPERFAMILY Ubiquitin-like 42 113 IPR029071 -
Lapu6g01932 597 Pfam Phosphatidylinositol 3- and 4-kinase 292 541 IPR000403 -
Lapu6g01932 597 Gene3D - 35 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01932 Lapu-Chr6 19208448 19211540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01932 33 591 Acyl Lipid Metabolism Gene Families AT5G24240 55.752 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01932 - - gmx:100791631 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01932 6 19208448 19211540 Lapu10g00247 10 4514413 4517766 PCT