Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01929 ATGGAAGGGAAGAAAAATACAACAAATGGCCTTCTTTTCCTGTCTCTCGCCCTCGCCCTCTCCCTTTCAGCCGCCACCACCCACCCATTCCAACTCCAAACCCAAACCTTACCTCTCCACTCCCTCCCGCACCCACCCACTGTCTCGTGGCCCGAAGACGAAGCCCTGTCAGAACCCGACCCGGAAGAAGCTCTCTCCCTTAGCCTCCACCACATAGATGCACTCTCCTCCGGCAAAACCCCGGAGCAGCTCTTCCACCTCAGGCTCCAACGCGACGACAAAAGAGTCCAGTCCCTACTCACGCTCGCAGCCCTCAACAGCAGCCACGCGCGCAGATCCGGCTCCGGTTTCAGCAGCTCCATCATATCGGGTCTAGCACAAGGAAGCGGCGAGTACTTCACGCGCATAGGCGTTGGTACTCCCGCTAGGTACGTCTACATGGTCTTGGACACCGGAAGCGACGTCGTTTGGCTCCAATGCGCCCCCTGCCGCAAATGCTACTCCCAAACCGACCCCGTTTTCGACCCCACCAAATCCCGAACCTACGCCGGAATCCCCTGCGGGGCCCCTCTCTGCCGCAGGTTAGACTCTCCCGGCTGCAACAAGAACAAGGTTTGCCAGTACCAGGTTTCCTACGGCGACGGTTCTTTCACATTCGGCGATTTCTCCACCGAAACACTGACGTTTCGAAGGACAAGAGTTACGCGCGTCGCGCTCGGCTGTGGCCACGACAATGAAGGACTCTTCATAGGCGCTGCTGGTTTATTAGGCCTGGGCCGGGGCAGGTTATCGTTTCCTGTGCAGACCGGACGCCGGTTCAACCAGAAGTTCTCTTACTGCCTCGTGGACCGTTCAGCGACGGCCAAACCGTCCTCCGTTGTCTTCGGAGATTCCGCTGTTTCCCGAACCGCGCGGTTCACTCCTCTTCTCAAAAACCCCAAGCTCGACACCTTCTACTACGTGGAGCTCCTCGGGATCAGCGTCGGTGGCGCGCCGGTGCACGGCCTCTCCGCCTCGCTATTCCGCCTAGACGCGGCCGGGAACGGCGGCGTTATAATCGACTCAGGCACGTCCGTCACCCGGTTGACCCGACCCGCATACATTGCCCTTCGGGACGCGTTCCGCGTCGGAGCCTCGCGCCTGAAGCGAGCGCCGGAGTTCTCACTCTTCGACACGTGTTTTGATCTGTCCGGGCTAACGGAGGTAAAGGTGCCGACGGTGGTACTGCATTTCCGTGGTGCGGACGTGTCACTTCCGGCGTCGAATTACTTGATTCCGGTGGATAATAGCGGGAGCTTCTGCTTCGCTTTTGCGGGGACCATGAGTGGCTTGTCCATAATTGGTAACATCCAGCAACAAGGATTCCGGGTTTCCTACGACCTGGCGGGTTCGCGGGTCGGGTTTGCCCCGAGAGGATGCGTTTGA 1425 0.593 MEGKKNTTNGLLFLSLALALSLSAATTHPFQLQTQTLPLHSLPHPPTVSWPEDEALSEPDPEEALSLSLHHIDALSSGKTPEQLFHLRLQRDDKRVQSLLTLAALNSSHARRSGSGFSSSIISGLAQGSGEYFTRIGVGTPARYVYMVLDTGSDVVWLQCAPCRKCYSQTDPVFDPTKSRTYAGIPCGAPLCRRLDSPGCNKNKVCQYQVSYGDGSFTFGDFSTETLTFRRTRVTRVALGCGHDNEGLFIGAAGLLGLGRGRLSFPVQTGRRFNQKFSYCLVDRSATAKPSSVVFGDSAVSRTARFTPLLKNPKLDTFYYVELLGISVGGAPVHGLSASLFRLDAAGNGGVIIDSGTSVTRLTRPAYIALRDAFRVGASRLKRAPEFSLFDTCFDLSGLTEVKVPTVVLHFRGADVSLPASNYLIPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVSYDLAGSRVGFAPRGCV* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01929 474 CDD cnd41_like 131 473 IPR033873 -
Lapu6g01929 474 FunFam Aspartyl protease family protein 2 297 473 - -
Lapu6g01929 474 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 147 158 IPR001969 GO:0004190|GO:0006508
Lapu6g01929 474 Pfam Xylanase inhibitor N-terminal 132 297 IPR032861 -
Lapu6g01929 474 Pfam Xylanase inhibitor C-terminal 319 469 IPR032799 -
Lapu6g01929 474 PANTHER ASPARTYL PROTEASES 9 467 IPR001461 GO:0004190|GO:0006508
Lapu6g01929 474 MobiDBLite consensus disorder prediction 43 63 - -
Lapu6g01929 474 SUPERFAMILY Acid proteases 125 473 IPR021109 -
Lapu6g01929 474 FunFam aspartyl protease family protein 2 109 295 - -
Lapu6g01929 474 Gene3D Acid Proteases 295 474 IPR021109 -
Lapu6g01929 474 ProSiteProfiles Peptidase family A1 domain profile. 132 469 IPR033121 -
Lapu6g01929 474 Gene3D Acid Proteases 110 294 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01929 Lapu-Chr6 19193264 19195326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g01929 107 473 Miscellaneous Gene Families AT1G77480 27.228 8.23e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01929 K22683 - gmx:100794269 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01929 6 19193264 19195326 Lapu10g00249 10 4533110 4534860 PCT