Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g01145 ATGGCGGTGGAATATGAGTGCTGTGAAACTCAGTTTTTCATACGGTTACTGATAATTGTGCTGCTTGTGTTGTTTGCTGGATTGATGTCAGGGCTCACTTTAGGACTCATGTCCTTGAGTCTTGTTGATCTTGAGGTTCTTGCTAAGTCTGGCACCCCTCAGGATCGCAAACATGCCGCGAAGATATTGCCTGTTGTCAGAAATCAACATTTGTTGCTTTGCACCCTTCTAATTTGCAACGCTGCAGCCATGGAGGCACTTCCTATCTTTCTTGATAGTCTTGTTGTTGCATGGGGTGCTGTCTTGATTTCAGTAACATTAATTCTCCTGTTTGGTGAGATTATACCACAATCAATTTGTTCTCGGTATGGTTTAGCAATTGGTGCAACAGTGGCTCCAGTTGTCCGTGTTCTTGTATGGATATGTTTTCCTGTTGCCTATCCAATTAGCAAGTTGTTGGACTATTTGCTGGGGCATCGACATGAAGCACTTTTCCGCAGAGCTGAGTTGAAAACACTGGTGAATCTGCATGGAAATGAGGCTGGAAAAGGCGGAGAACTGACACATGATGAAACAACAATCATTGCTGGAGCACTTGAACTCACTGAGAAGACAGCCAGTGATGCCATGACTCCCATAACTGAAATATTTTCTGTTGATATTAATTCAAAGCTTGATAGGGAATTGATGAATCTAATATTGGAGAAAGGGCATAGCAGAGTCCCTGTCTACTACGACGAGACTACAAATATTATTGGACTTATCTTGGTCAAGAATTTACTGACAATTGACCCAGAAGAAAGGGTACCGGTGAAAAGTGTGACCATACGGAGAATCCCAAGGGTCCCAGAAACAATGCCACTGTATGATATTTTGAACGAGTTCCAGAAGGGCCATAGCCACATGGCTGTTGTTGTCAGACACACTGACAAGACAGGTCAACACTCGTCCAACTATAATGCCAATGCGAGAGATGTGAAGGTGGACATTGATGGGGAGAAGACTTTCCAAGAGAATAATATGTTGAAAACCAAGAGGTCACTCCAAAAGTGGAAGAGCTTTCCAAACTCAAATAATTCGAACAGGGGTGGTTCCAGGAGCAGAAAATGGTCAAAAAATATGTACTCAGATATTTTGGAAATAGATGGAAATACACTTCCAACGCTGCCAGAAAAAGAGGAGGCTGTTGGAATTATTACCATGGAAGATGTCATTGAAGAACTTTTACAGGAGGAGATCTTTGATGAGACGGATCATCACTTTGAAGACTCATGA 1275 0.4243 MAVEYECCETQFFIRLLIIVLLVLFAGLMSGLTLGLMSLSLVDLEVLAKSGTPQDRKHAAKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVVAWGAVLISVTLILLFGEIIPQSICSRYGLAIGATVAPVVRVLVWICFPVAYPISKLLDYLLGHRHEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPITEIFSVDINSKLDRELMNLILEKGHSRVPVYYDETTNIIGLILVKNLLTIDPEERVPVKSVTIRRIPRVPETMPLYDILNEFQKGHSHMAVVVRHTDKTGQHSSNYNANARDVKVDIDGEKTFQENNMLKTKRSLQKWKSFPNSNNSNRGGSRSRKWSKNMYSDILEIDGNTLPTLPEKEEAVGIITMEDVIEELLQEEIFDETDHHFEDS* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g01145 424 PANTHER METAL TRANSPORTER CNNM 3 421 IPR045095 GO:0010960
Lapu6g01145 424 SUPERFAMILY CBS-domain pair 194 410 IPR046342 -
Lapu6g01145 424 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Lapu6g01145 424 Pfam CBS domain 215 262 IPR000644 -
Lapu6g01145 424 FunFam DUF21 domain-containing protein 189 324 - -
Lapu6g01145 424 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Lapu6g01145 424 Gene3D - 189 323 IPR046342 -
Lapu6g01145 424 MobiDBLite consensus disorder prediction 350 369 - -
Lapu6g01145 424 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Lapu6g01145 424 Gene3D - 378 416 IPR046342 -
Lapu6g01145 424 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g01145 Lapu-Chr6 11388399 11392301 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g01145 K16302 - gmx:100795897 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01145 6 11388399 11392301 Lapu6g01145 6 11388399 11392301 ECH
Lapu3g02922 3 52281765 52287908 Lapu6g01145 6 11388399 11392301 PCT