Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00750 ATGCTGAGCGTGCTGCGCGTGCACCTCCCTTCTGATATTCCCATTGTAGGCTGTGAGCTCACGCCTTACGTGCTCCTACGCCGACCTGATAAGACAGTTACCACCGACGATGTCCCCGAAGCCGCCCCGTTAGACGGCCATTTCTTGCTCTACAAGTGGTATCGTGTACAGAGTGATAAAAAGGTTGCTGTTTGTAGTGTACATCCATCTGAGCAGGCCACTCTGCAGTGCCTTGGTTGTCTAAAGACTAAAATACCTGTTGCCAAAAGTTACCACTGCACTCCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGCGTCTTACATGACCGTGCTGCAAGTTCGGGTAATGAAAATGGAAATGAGGAAGAAGAGTTATTTGGGCGATTTAATAATTCTGGATCTGGATCAATCAATACCACCATATCTGCCTCTGCATCAAGTGCTAGCTTGACAAATGGGTCTGCGCCTGTGTATCCAGCAGCCATTACACAACGAAGTGGTGGTGAAACTTGGTTTGAAGTTGGACGGTCTAAGACATATACACCAACAGCTGATGACATTGGTCATGTCCTTAAATTTGAGTGTGCTGTAGTTGATGCAGAGACCAAACTGACTGTAGGGCATGCTAGCACTCTACTAACTTCCCGTGTCATTCCTGCACCCTCGCCTAGCCCACGTCGAATAATACCAGTTGAGGGGATGGGACATTTGGAAGCTGATGGGCGTATAACACCGTCAGGAACTTTTTCTGTTCTATCATACAACATATTGTCTGATGCATATGCCTCAAATGATCTATACAATTACTGTCCTTCATGGGCTCTTTCCTGGCCTTATCGCAGGCAGAATTTGTTACGAGAAATAGTTGTTTACCGTGCTGATATTATTTGTCTTCAGGAGGTTCAAAGTGACCATTATGAAGAATTTTTTTCTCCTGAACTAGACAAACATGGCTATTATGGTCTTTACAAAAGGAAAACGAATGAGGTATATAGTGGCAACATTAATACAATTGATGGGTGTGCAACATTCTTCCGTAGAGACAGATTTTCACATGTGAAAAAATACGAGGTTGAATTTAATAAGGCTGCACAGTCTTTAACAGATGCTGTGATTCCAACCACTCAGAAGAAAACTGCCTTGAATAGACTGGTTAAGGATAATGTTGCACTAATAGTCGTTTTAGAAGCAAAAGTTAACAATCAGCCTGTTGATAATCCTGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTTCACCAAGATTTAAAGGATGTCAAACTTTGGCAGGTGCACACCCTTTTGAAAGGATTGGAGAAAATTGCTGCTAGTGCAGACATTCCAATGTTGGTTTGTGGGGACTTTAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTCGCAATGGGAAAGGTAGATCCATCACATCCTGATTTAGCAGTTGATCCACTTAATATATTGCGTCCTCACAGCAAGTTGGTTCACCAGTTGCCACTGGTCAGTGCTTATTCGTCCTTTGCAAGAACAGGTGGTCTTGGATTTGAGCAGCAGCATAAACGGAGACTAGATAATGCAACAAATGAACCTTTGTTCACTAATGTAACCAGAGATTTTATTGGCTCTCTAGATTACATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTGTTGGAGCTATTGGACGAGGAGAGTTTGAGGAAAGACACAGCGCTCCCTTCTCCTGAATGGTCCTCTGATCATATAGCTCTGTTAGCCGAGTTTCGCTGCTGCAAGAATAGATCTCGGAGATGA 1806 0.4341 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVPEAAPLDGHFLLYKWYRVQSDKKVAVCSVHPSEQATLQCLGCLKTKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASSGNENGNEEEELFGRFNNSGSGSINTTISASASSASLTNGSAPVYPAAITQRSGGETWFEVGRSKTYTPTADDIGHVLKFECAVVDAETKLTVGHASTLLTSRVIPAPSPSPRRIIPVEGMGHLEADGRITPSGTFSVLSYNILSDAYASNDLYNYCPSWALSWPYRRQNLLREIVVYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKRKTNEVYSGNINTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAVIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTGGLGFEQQHKRRLDNATNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00750 601 Gene3D Endonuclease/exonuclease/phosphatase 220 600 IPR036691 -
Lapu6g00750 601 SUPERFAMILY DNase I-like 246 595 IPR036691 -
Lapu6g00750 601 CDD Deadenylase_CCR4 252 594 - -
Lapu6g00750 601 FunFam Carbon catabolite repressor protein 4 1 219 599 - -
Lapu6g00750 601 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 161 594 - -
Lapu6g00750 601 Pfam Endonuclease/Exonuclease/phosphatase family 253 585 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00750 Lapu-Chr6 7870873 7878825 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00750 K12603 - gmx:100808935 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00750 6 7870873 7878825 Lapu6g00750 6 7870873 7878825 ECH
Lapu6g00750 6 7870873 7878825 Lapu7g00180 7 1892576 1899941 PCT