Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00176 ATGGCCAATGCGCTACATAACGCTGCCATGTCTTGTGGTTTTCCATCCCTATCCACTCTTCCTCTCAGAGCCATGCATAAAGGAAAACATATGGAGCTGAACAAAATGGCTGTGGTGATAAAGGGAAAGACTAATAGCGATTTTGACGACTCAGGCGTTGATATTTCTTTGAGTCACACAGTTGATGCTGTGGAAACTTCTAAGACTCTAGCCATATGTGATCATGCCACTGCTCTTTTACAATCTGGAGTTCCCGTTATTCGCTTATTTTTTGGAGAATCTGATTTTGACACACCTGCTGTGATAGCTGAGGCTGGGATGAATGCAATTCGTGATGGTTACACCAGATATACTCCCAATGCTGGAACATTAGAATTGTGCCAAGCCATATGTCACAAGCTAAAAGAGGAGAATGGAATTATATATTCTCCTGATCAGATTGTGGTCAGTAATGGAGCCAAGCAAAGTATTGTTCAAGCAGTGCTTGCAGTTTGTTCCCCAGGAGACGAGGTTATTATACCAGCTCCATTCTATGTGAGTTACCCAGAAATGGCAAGACTGGCTCATGCAACTCCAGTGATTCTTCCAACCCACATATTGAATAATTTTCTTTTGGACCCCAAACTGCTAGAAGACAACCTTACAGAAAGATCCCGACTACTTATTCTTTGTTCACCGTGTAACCCAACAGGATCTGTCTATCCTAAGAAATTACTTGAAGAGATAGCCCAAATTGTAGCAAAGCACCCCAGGCTTCTGGTTCTTTCTGATGAAAATTATGAACACATAATTTATGCACCAGCAACTCATACAAGCTTTGCATCTTTACCTGGAATGCGGGACAGAACTCTAACTGTGAATGGACTTTCCAAGACATTTGCAATGACCGGTTGGCGGCTTGGGTATATTGCTGGTCCAAAGCATTTTGTTGCAGCATGTGGGAAGATTCAAAGCCAGATTACCTCAGGAGCAAGTAGTATATCTCAGAAAGCTGCGGTTGCTGCATTAGGATTAGGCTATGCAGGCGGAGAAGCTGTTTCTAGCATGGTGAAAGCGTTCAGGGAAAGAAGGGATTTCTTGGTTGAAAGCTTTAGAGATGTGGATGGTGCGAAAATATGTGAACCACAGGGGGGATTCTATGTATTCATTGATTTGAGCTCTTATTATGGAAGACAAGCTGAAGGGTTCGGTTTAATTGAAAATTCTGACTCCCTCTGTCGCTATCTGCTGGAGGAGGGCCAGGTTGCTTTGGTTCCGGGGAGTGCATTTGGAGACGATACTTGCATCCGCGTCTCTTTTGCAGAATCCCTTGCTACTTTAAACGCAGCTGTAGATAGAATTAAGAAAGCACTCATCTCTCTA 1362 0.4325 MANALHNAAMSCGFPSLSTLPLRAMHKGKHMELNKMAVVIKGKTNSDFDDSGVDISLSHTVDAVETSKTLAICDHATALLQSGVPVIRLFFGESDFDTPAVIAEAGMNAIRDGYTRYTPNAGTLELCQAICHKLKEENGIIYSPDQIVVSNGAKQSIVQAVLAVCSPGDEVIIPAPFYVSYPEMARLAHATPVILPTHILNNFLLDPKLLEDNLTERSRLLILCSPCNPTGSVYPKKLLEEIAQIVAKHPRLLVLSDENYEHIIYAPATHTSFASLPGMRDRTLTVNGLSKTFAMTGWRLGYIAGPKHFVAACGKIQSQITSGASSISQKAAVAALGLGYAGGEAVSSMVKAFRERRDFLVESFRDVDGAKICEPQGGFYVFIDLSSYYGRQAEGFGLIENSDSLCRYLLEEGQVALVPGSAFGDDTCIRVSFAESLATLNAAVDRIKKALISL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00176 454 PANTHER ASPARTATE AMINOTRANSFERASE 55 451 - -
Lapu6g00176 454 Gene3D Aspartate Aminotransferase, domain 1 70 445 IPR015422 GO:0003824
Lapu6g00176 454 FunFam Aspartate aminotransferase 116 338 - -
Lapu6g00176 454 SUPERFAMILY PLP-dependent transferases 57 451 IPR015424 -
Lapu6g00176 454 Gene3D - 116 338 IPR015421 GO:0003824
Lapu6g00176 454 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 288 301 IPR004838 GO:0003824|GO:0009058|GO:0030170
Lapu6g00176 454 CDD AAT_like 87 449 - -
Lapu6g00176 454 Pfam Aminotransferase class I and II 86 447 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00176 Lapu-Chr6 1471400 1474414 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00176 K15849 - gmx:100780254 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00176 6 1471400 1474414 Lapu6g00176 6 1471400 1474414 ECH
Lapu3g03338 3 56678793 56682882 Lapu6g00176 6 1471400 1474414 PCT