Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01376 ATGATTTCAATAAAGAGAAGACAAAGAGGTGCTCCAGCCACAATGCACTCAGTTGGCCCTCAAGTTCATCCTAGTATGCAAGATGAAGACTACAATCTGAGGGAGACCGATCCACAGCTTGGGGGAGAGCGGTGGCCTAGTGCCAGAAGAGGGTGGATGAGTGGTGGTGAAAGATTCACAAGCACACATGACCTTGTTGAGCAGATGTTCTATCTGTATGTTCGGGTAGTGAAAGCCAAGGATCTTCACCGCAGCACTCTTACCACAAGCTGTGATCCTTATGTGGAAGTGAAGCTGGGGAACTACAAAGGGAGAACGAAGCACATAGAGAAGAAAACAAATCCAGAATGGAACCAAGTCTACGCTTTCTCCAAAGACAAAATTCAATCTTCTGTGTTGGAAGTCATAGTGAAAGACAAAGAAATGTTGGGAAGAGATGATAGTATTGGAAGGGTGACATTTGATCTCAATGAGGTTCCAACCAGAGTTCCCCCGGATAGTCCACTGGCACCTCAGTGGTACAGACTCGACGACCGGCGAGGAGGTGATATCATGCTTGCAGTTTGGATGGGAACTCAAGCTGATGAGGCCTTCTCAGAGGCTTGGCATTCTGATGCTGCCACTGTGTATGGAGAGGGTGTTTTCAATGTAAGATCAAAGGTTTATTTGTCCCCAAAACTGTGGTATCTCAGGGTGAATGTCATTGAAGCACAAGATGTGATACCAAGTGACAGAAACCGGCTGCCAGAGGTTTTTGTCAAGGCTCATATGGGGAGCCAAGTGTTGAAGACCAAGATATGTCCAACTAGGACAACCACACCACTTTGGAATGAAGATTTGGTCTTTGTGGCAGCTGAACCATTTGAGGAGAAGTTGACAGTGACAGTGGAGGATCGCGTGCACCCTTCAAAAGATGAAGTTCTTGGGAAGATAATATTGCCATTGACCCTCTTTGAGAAGCGCCTAGACCACAGGCCAGTTCATTCGCGCTGGTACAATCTTGAGAAGTTTGGTTTTGGAATGATGGAAGCTGATAGGAGAAATGAGCTTAAATTTTCAAGCAGGATTCACCTAAGAATTTGCCTTGAAGGTGGATACCACGTCCTTGATGAGTCCACTTTGTACTCAAGCGACCAAAGACCAACAGCTAGACAGCTATGGAAGCAGCCTATTGGGGTACTGGAAGTAGGCATCTTAGGAGCACAAGGACTCCTCCCAATGAAGATGAGGGATGGCCATGGCAGCACAGATGCCTACTGTGTTGCCAAGTACGGTCAAAAATGGGTCAGAACCCGAACAATTCTTGACACTCATAGTCCCAAGTGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCTCTGTGATAACACTTGGTGTTTTTGACAACTGTCATTTAGGGGGAGGCGAAAAAGCTACTGCTGGCACTGTTGCCAGGGATGCAAGAATTGGAAAGGTAAGAATTAGACTCTCAACACTTGAAGCTCATAGGATATACACTCATAGTTATCCACTTCTTGTTTTGCACCCACATGGTGTCAAGAAAATGGGTGAGCTTCAACTAGCCGTGAGGTTCACTAGCCTCTCACTGGCTAACATGGTTTACATTTATGGCCAACCCTTGCTTCCAAAAATGCATTACTTGCGCCCTTTCACAGTTAACCAAATAGAGAGTTTGAGGTACCAAGCCATGAACATTGTGGCTGGGAGGCTTGGAAGAGCTGAACCTCCCCTCAGGAAGGAGGTGGTGGAGTACATGTTGGATGTTGACTCCAATATGTGGAGCATGAGAAGAAGCAAAGCCAACTTCTTCCGCATCATGTCACTTTTCTCTGGCATCATCACAATGGGGCAGTGGTTTAGCCAAGTTAGCCATTGGAAGAACCCCATCACATCCGTCCTAGTTCACATTCTCTTCTTCATACTCATTTGCTACCCTGAATTGATACTTCCAACTTTGTTCCTCTACATGTTCTTGATTGGCCTGTGGAACTATAGGTTTAGGCCAAGAAACCCACCCCACATGGACACAAAACTCTCGTGGGCAGAAGCCGTTCACCCTGATGAACTTGATGAAGAGTTTGACACATTCCCAACTTCAAGACCACATGATGTGGTGAGAATGAGGTATGACAAGCTTAGAAGTGTTGCAGGAAGGATCCAGACAGTTGTTGGGGACATAGCAACGCAGGGAGAGAGGTTTCATTCTCTACTGAGTTGGAGAGACACCAGAGCCACCAGCCTCTTCGTCGTGTTCAGTTTGTGTTCAGCTGTGATTCTCTATGCAACGCCCCCAAAAGTGGTGGCTCTGGTAACTGGTTTATATTATCTAAGGCATCCAAAGTTTCGTAGCAAACTTCCTTCTGTACCCAGCAACTTCTTCAAGAGGCTTCCAGCTAGAACAGACAGCATGCTGTGA 2421 0.463 MISIKRRQRGAPATMHSVGPQVHPSMQDEDYNLRETDPQLGGERWPSARRGWMSGGERFTSTHDLVEQMFYLYVRVVKAKDLHRSTLTTSCDPYVEVKLGNYKGRTKHIEKKTNPEWNQVYAFSKDKIQSSVLEVIVKDKEMLGRDDSIGRVTFDLNEVPTRVPPDSPLAPQWYRLDDRRGGDIMLAVWMGTQADEAFSEAWHSDAATVYGEGVFNVRSKVYLSPKLWYLRVNVIEAQDVIPSDRNRLPEVFVKAHMGSQVLKTKICPTRTTTPLWNEDLVFVAAEPFEEKLTVTVEDRVHPSKDEVLGKIILPLTLFEKRLDHRPVHSRWYNLEKFGFGMMEADRRNELKFSSRIHLRICLEGGYHVLDESTLYSSDQRPTARQLWKQPIGVLEVGILGAQGLLPMKMRDGHGSTDAYCVAKYGQKWVRTRTILDTHSPKWNEQYTWEVYDPCSVITLGVFDNCHLGGGEKATAGTVARDARIGKVRIRLSTLEAHRIYTHSYPLLVLHPHGVKKMGELQLAVRFTSLSLANMVYIYGQPLLPKMHYLRPFTVNQIESLRYQAMNIVAGRLGRAEPPLRKEVVEYMLDVDSNMWSMRRSKANFFRIMSLFSGIITMGQWFSQVSHWKNPITSVLVHILFFILICYPELILPTLFLYMFLIGLWNYRFRPRNPPHMDTKLSWAEAVHPDELDEEFDTFPTSRPHDVVRMRYDKLRSVAGRIQTVVGDIATQGERFHSLLSWRDTRATSLFVVFSLCSAVILYATPPKVVALVTGLYYLRHPKFRSKLPSVPSNFFKRLPARTDSML* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01376 806 CDD C2D_MCTP_PRT_plant 393 523 IPR047255 -
Lapu5g01376 806 CDD C2C_MCTP_PRT_plant 229 381 IPR047258 -
Lapu5g01376 806 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 24 806 IPR047259 -
Lapu5g01376 806 FunFam C2 domain-containing protein 215 362 - -
Lapu5g01376 806 Pfam Plant phosphoribosyltransferase C-terminal 651 806 IPR013583 -
Lapu5g01376 806 ProSiteProfiles C2 domain profile. 209 332 IPR000008 -
Lapu5g01376 806 FunFam C2 domain-containing protein 66 207 - -
Lapu5g01376 806 FunFam C2 domain-containing protein 375 530 - -
Lapu5g01376 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 228 383 IPR035892 -
Lapu5g01376 806 SMART C2_3c 71 168 IPR000008 -
Lapu5g01376 806 SMART C2_3c 229 329 IPR000008 -
Lapu5g01376 806 SMART C2_3c 393 503 IPR000008 -
Lapu5g01376 806 Gene3D C2 domain 216 362 IPR035892 -
Lapu5g01376 806 Gene3D C2 domain 374 530 IPR035892 -
Lapu5g01376 806 Gene3D C2 domain 59 191 IPR035892 -
Lapu5g01376 806 Pfam C2 domain 71 174 IPR000008 -
Lapu5g01376 806 Pfam C2 domain 392 506 IPR000008 -
Lapu5g01376 806 Pfam C2 domain 228 334 IPR000008 -
Lapu5g01376 806 MobiDBLite consensus disorder prediction 1 28 - -
Lapu5g01376 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 71 206 IPR035892 -
Lapu5g01376 806 CDD C2B_MCTP_PRT_plant 71 192 IPR047257 -
Lapu5g01376 806 ProSiteProfiles C2 domain profile. 53 174 IPR000008 -
Lapu5g01376 806 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 392 528 IPR035892 -
Lapu5g01376 806 ProSiteProfiles C2 domain profile. 375 504 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01376 Lapu-Chr5 26942583 26945532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01376 29 806 Lipid Metabolism Gene Families AT5G06850 73.952 0.0 1256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01376 - - gmx:100785340 1546.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g00109 1 5915748 5919720 Lapu5g01376 5 26942583 26945532 ECH
Lapu7g00213 7 2379451 2383372 Lapu5g01376 5 26942583 26945532 ECH
Lapu7g02610 7 42320910 42324923 Lapu5g01376 5 26942583 26945532 ECH
Lapu5g01376 5 26942583 26945532 Lapu5g01376 5 26942583 26945532 ECH