Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00825 ATGGATACAGTGAGTTCAGCTCCTCTCCACATAGCAGTATTTCCATGGTTTGCTATAGGACACCTCACCCCTAATCTTCACCTCTCCAACAAGTTAGCAGAGAGAGGCCACAGAATCTCCTGCATAGTCCCACAAAGAACACATACCAAGCTACACCACCTCATTCTCCACCCTCATCTCATCACCTTTTTCCCCATCAAAATTCCTCATGTCGATGGCCTTCCTCACCTTGCTGAGACCACTTCAGACGTGCCCTTCTCTTTGTTCCCACTTATTGCCACCGCTATGGATCACACAGAGAAGGACATAGAACTTCTCCTCAGGGATCTGAAGCCACAGATTGTTTTTTTCGATTTCCAACATTGGCTACCAAACTTGGCACGAAAGTTGGGCATCAAGTGCATGCAATACTTCATAGTCAATCCGCTGTCAATCGCTTACTTTTGGAACGGACCAAGGCAGAGCCAAGGAGGAGAATTAACTGATGTTGATCTCATGAAACCACCTGAGGGGTTCCCTGATTCATCCATCAAGCTTCATGCACATGAAGTTCGATTCCTTGCCGCCACAAGAAAACTAGAGTTTGGAAGAAGTGGTGTTCTTTTGTACGATCGTTGGGGCATAGGTACAAGCTTGGCAGATGCAATTGGATTCAAAGGCTGCAGAGAACTTGATGGGCCATATGCGGAATATCTCGAAACTGTGTATGGGAAGCCTGTTTTGCTTTCAGGGCCTCTTTTACCTGAACCACCAAACTCTACATTGGAGGAAAAATGGGTTGCATGGCTTGGGGGTTTCAAGCATGGTTCTGTTGTTTTCTGTGCATTTGGAAGCGAAAGCCCGTTACCACAAAATCAGTTTCAAGAGCTGTTGCTTGGTCTTGAACTAACAGGTTTTCCATTTCTTGCAGCATTTAAGCCTCCTAATGGATTTGAGTCTGTTGAAGAAGCTCTGCCAGAAGGGTTCAGAGAAAGGGTCAAAGGAAGAGGGATTGCATATGGAGGTTGGGTGCCACAACAATTGATCTTGGGACACCCTTCTGTTGGATGCTTCATAACACACTGTGGAGCTGCTTCTGTAACAGAGGCTCTTGTGAATAAGTGTCAATTAGTGTTCTTACCTAGGCTGGGTGCTGATCATGTCATCAATGCTAGATGGCTGAGTAGAAAATTGAAGATTGGTGTGGAAATGGAGAAAGGTGAAGAAGATGGTTTGTTCACCAAAGAAAGTGTATGGAAAGCAGTGACAACTGTGATGGATGATGAGAATGAGGTTGGAAGAGAAGTGAGACAAAATCATGACAAACTCAGGAACTTCTTACTCAGCGACAATTTAGAGTCTGCATGCGTTGATGGTTTCTGCAGACAACTTCAAGATTTGTTATAA 1386 0.4481 MDTVSSAPLHIAVFPWFAIGHLTPNLHLSNKLAERGHRISCIVPQRTHTKLHHLILHPHLITFFPIKIPHVDGLPHLAETTSDVPFSLFPLIATAMDHTEKDIELLLRDLKPQIVFFDFQHWLPNLARKLGIKCMQYFIVNPLSIAYFWNGPRQSQGGELTDVDLMKPPEGFPDSSIKLHAHEVRFLAATRKLEFGRSGVLLYDRWGIGTSLADAIGFKGCRELDGPYAEYLETVYGKPVLLSGPLLPEPPNSTLEEKWVAWLGGFKHGSVVFCAFGSESPLPQNQFQELLLGLELTGFPFLAAFKPPNGFESVEEALPEGFRERVKGRGIAYGGWVPQQLILGHPSVGCFITHCGAASVTEALVNKCQLVFLPRLGADHVINARWLSRKLKIGVEMEKGEEDGLFTKESVWKAVTTVMDDENEVGREVRQNHDKLRNFLLSDNLESACVDGFCRQLQDLL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00825 461 Gene3D Glycogen Phosphorylase B; 3 260 - -
Lapu5g00825 461 PANTHER GLYCOSYLTRANSFERASE 9 446 - -
Lapu5g00825 461 CDD GT1_Gtf-like 9 437 IPR002213 GO:0008194
Lapu5g00825 461 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 334 422 IPR002213 GO:0008194
Lapu5g00825 461 FunFam Glycosyltransferase 259 442 - -
Lapu5g00825 461 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 442 - -
Lapu5g00825 461 Gene3D Glycogen Phosphorylase B; 261 440 - -
Lapu5g00825 461 FunFam Glycosyltransferase 5 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00825 Lapu-Chr5 8555025 8564613 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00825 9 461 Glycosyltransferase AT4G27570 45.295 8.79e-140 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00825 K22794 - gmx:100808439 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00825 5 8555025 8564613 Lapu5g00819 5 8429710 8430755 PCT