Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00819 ATGGAAGCATCTTCTCTGCACATAGCAATGTTTCCATGGTTTGCTATGGGACATTTAACTCCATTTCTCCACCTCTCCAACAAATTAGCAAAGAGAGGACACAAGATCTCCTTCTTCATCCCAAGAAAAACACAGTCCAAGTTAGAGCATTTCAATCTCTTCCCACATCTCATTACCTTTTTTCCTATCGATGTTCCTCATGTTGAAGGTCTTCCTCTTGGTGCAGAAACTACTTCAGATGTGTCTTTTTCTTTAGGTCCACTCGTTATGACAGCTATGGATGGCACTGAGAGGGATATAGAGCTTCTCCTCCTAGATTTGAAGCCACAAATTGTTTTCTTTGACTTCACATATTGGATCCCAAGCATGACTCGTCGCTTGGGGATCAAATCCTTTCAATACTTGATTGTTAGCCCTGCAACAATATCTTACACTGCAGCCCCTCCAAGGATGAACCACAATGGTAGTTTAACTGAATTTGACCTTATGCAACCCCCTCTTGGTTATCCTGTATCATCCATCAAACTTTATGCACATGAAGCTAAGTTCCTTGCTTCTAAGAGGAACTGGGAATTTGGTAGTGGTGTTCTCTTTTATGACCGCATTTACAGTGGTCTAACCCTATCAGATGCAATTGGATTTAAAGGTTGTAGAGAAATTGAGGGGCCTTATATTGATTACCTTGAAGAGCAGTTTGGGAAGCCTGTTCTCCTTTCTGGACCTGTCATACCTGAGTCACCCAACACTGTTTTAGAGGAAAAATGGAGTTCATGGCTTGGAAGGTTGAAGGATGGTTCTGTGATTTTTTGTGCACTTGGGAGTGAATGGAAATTAACTCATGGTGAATTCAAAGAATTGTTGTTGGGTCTTGAACTTACAGGACTTCCATTTTTGGCTGTTGTGAAGGTTCCTATTGGGTTTGAGACAGTTGAAGGTGCACTCCCAGAAGGGTTTAAGGAAAGGATTGAAGGGAGAGGGATTGTCCACAGTGGATGGATACAACAACAG 1008 0.4196 MEASSLHIAMFPWFAMGHLTPFLHLSNKLAKRGHKISFFIPRKTQSKLEHFNLFPHLITFFPIDVPHVEGLPLGAETTSDVSFSLGPLVMTAMDGTERDIELLLLDLKPQIVFFDFTYWIPSMTRRLGIKSFQYLIVSPATISYTAAPPRMNHNGSLTEFDLMQPPLGYPVSSIKLYAHEAKFLASKRNWEFGSGVLFYDRIYSGLTLSDAIGFKGCREIEGPYIDYLEEQFGKPVLLSGPVIPESPNTVLEEKWSSWLGRLKDGSVIFCALGSEWKLTHGEFKELLLGLELTGLPFLAVVKVPIGFETVEGALPEGFKERIEGRGIVHSGWIQQQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00819 336 Gene3D Glycogen Phosphorylase B; 258 336 - -
Lapu5g00819 336 PANTHER GLYCOSYLTRANSFERASE 6 336 - -
Lapu5g00819 336 FunFam Glycosyltransferase 2 255 - -
Lapu5g00819 336 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 336 - -
Lapu5g00819 336 Gene3D Glycogen Phosphorylase B; 2 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00819 Lapu-Chr5 8429710 8430755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00819 3 335 Glycosyltransferase AT5G54010 46.108 2.39e-106 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00819 K22794 - gmx:100808470 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00819 5 8429710 8430755 Lapu5g00819 5 8429710 8430755 ECH
Lapu5g00825 5 8555025 8564613 Lapu5g00819 5 8429710 8430755 PCT