Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00606 ATGGAGTTTCTGTTTCACCCTAAGCTCAACCATCTTTTATGCTTACTCATCCTTACCCTTTCATTTGCCCATGCTCAAGCTACTACCTTCAGATACTGCGCTGATGTGAACTATGTCGTGAAGGTATCTGGAGTTGAAATCACACCAGACCCTGTTGTGCGTGCTAGGCCTGTCAGCTTTAAAATTTCAGCTGCTACTCGTGAAGCTATTTATGGAGGAAAGTGGGTGATCATAGTTGCATACTTTGGCATTGTTGTCCATAAAGAAATCCATGATTTTTGTGAGGAAGTATCCTGTCCTGTTGCTACTGGCAGTTTTGTGGTTGCTCACACCCAAAAATTGCCTGCATTTGCCCCACCGGGCACCTACTCTGTGGAGATGACACTAAAAAATGAGAAGAACATGCCATTAACTTGCATCACGTTTAATTTAAGAATCGGTTTTGGATCCTTTGTGTCTGATATCTGA 468 0.4274 MEFLFHPKLNHLLCLLILTLSFAHAQATTFRYCADVNYVVKVSGVEITPDPVVRARPVSFKISAATREAIYGGKWVIIVAYFGIVVHKEIHDFCEEVSCPVATGSFVVAHTQKLPAFAPPGTYSVEMTLKNEKNMPLTCITFNLRIGFGSFVSDI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00606 155 SUPERFAMILY E set domains 27 146 IPR014756 -
Lapu5g00606 155 Gene3D - 28 147 - -
Lapu5g00606 155 SMART pgtp_13 30 144 IPR003172 -
Lapu5g00606 155 FunFam Putative phosphatidylglycerol/phosphatidylinositol transfer protein isoform A 28 149 - -
Lapu5g00606 155 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 10 146 IPR039670 GO:0015918|GO:0032934
Lapu5g00606 155 Pfam ML domain 28 146 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00606 Lapu-Chr5 5566602 5569479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00606 - - gmx:100818265 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00606 5 5566602 5569479 Lapu5g00606 5 5566602 5569479 ECH
Lapu5g00606 5 5566602 5569479 Lapu11g00265 11 5603687 5608440 PCT