Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00265 ATGGAGTTTCACTCTCTTCCCAAACTCTACCTTCTCTTCTCCTTATCCATTCTCTTTCTTTCACCCTTTCAAGCCCAAGCTACAATTAAAATCACTTACTGCGATAAGAAGACAAACTATGCTGTGAAGGTGTCTGGAGTGGATATATCACCAGACCCTGTGAAGAGTGGCCATCCGGCTACCTTTAGGATCTATGCTAGTTCAGGTAAAGCTATTCATGGTGGAGAGGTAGTCATTGGAGTTTCATATGTTGGGGTGCCTGTCCATACAGAAAACATTGATCTTTGTAAAGAAGTAAAGTGCCCTGTTGCTAATGGCAATTTTGTGATTTCACACACCCAAACATTGCCTGCAATTACTCCACCGGGACCTTACTCTCTGAAGATGACACTGAAGGATGATCGGGACGAGTTGTTAACTTGCATTAAGTTTAATTTTAAGATTGTTCTTGGATCTCTTGTGTCTGATATGTGA 474 0.4156 MEFHSLPKLYLLFSLSILFLSPFQAQATIKITYCDKKTNYAVKVSGVDISPDPVKSGHPATFRIYASSGKAIHGGEVVIGVSYVGVPVHTENIDLCKEVKCPVANGNFVISHTQTLPAITPPGPYSLKMTLKDDRDELLTCIKFNFKIVLGSLVSDM* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00265 157 FunFam putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 29 150 - -
Lapu11g00265 157 SUPERFAMILY E set domains 29 149 IPR014756 -
Lapu11g00265 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Lapu11g00265 157 Gene3D - 27 150 - -
Lapu11g00265 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 9 149 IPR039670 GO:0015918|GO:0032934
Lapu11g00265 157 SMART pgtp_13 31 146 IPR003172 -
Lapu11g00265 157 Pfam ML domain 29 148 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00265 Lapu-Chr11 5603687 5608440 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00265 - - pvu:PHAVU_011G100100g 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00606 5 5566602 5569479 Lapu11g00265 11 5603687 5608440 PCT