Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00597 ATGTCAACTTGTACGAACAAGAAAATCCAATTACCTAAATCTCAGAGAATAGACGAAGAGACTCTTCTGATGCAGAAGCAGGGCATTGTCACCATTTTGGGCTCTAACAATGATTCTGCCACTTCTCTTCGACGCACTCTATCCGCAGACATGTCTTCCAAGAAATGGCTTTCTCAAAACGGGTTTTCTCCCATGAAAAAGATCGCTTCCTCAGAAGAAATCTCTCACTCACTTACAGAACCCACTGTTGCTGACTCGTCATCTTCGTCAGAAGATGACAACAGCGAAGAAATGAAACAAAACCGGATCCAATTTTGGAAGACTATTCAAAAGGAGGAGAATGTGGAGAAACCGGGAGAGTTTGATGTATGGAGTTCAATTTTGTCGAAGAAAGCCAACGAAGAAAGCTCCAAATCAACAACTCTTCCTTATGTTCACCCACTTGTGAGAAGGTCAAAGAGCTGTCTGAGTGAAAAGAGTCTCGAGATATGCACGGAGAGTCTAGGATCCGAAACTGGCTCAGATGGGTTCTCTTCTTATTCCCCATCTGAGACAGAGGATTCAGATGAGGAGAAGGAAGACAAAAAAGAGGAAGAGAAAGAGAAAGAGAAAGTGGAACTTTCACACGAGGGAGAGTTTCAAGTGCCAAAACAAAACCATGTTGTGAAAAAATCTTCTCCTCGTTCTTTTCCTCCGCCACTCCCTTCACTTCACATGCAGTCCCACCGTGACAACGGAAGGTTGTTCATACAAGCTGTGTCTGTTCCTTCTCAGAACAATTTTTCTGCTCAACGAGAAAATGGTCGTCTTGTCCTCACTTTTGCTGATAGGTCTGAAGAAGAAGCAGAAGAAGAAGAGTTTGAGGAAGGCGATGATGAGGCAGAGGAACTTGATAGTTGTGGGAAGGAGCAAGTGCATGCACCCATGTTGTCGTGTAGAGGGATTGGGTTAGCATTAACGATGAAGAAACCAAGTGATTCTAATAGAACTGCAAAATGGTCGGAGAAGTTAAACGATGTGGTCAATTTTAAGGATGTTGATGTGGCACAACATAGTCCTCTGCCACCAAGGCCAAGGGCTCGGTTAATTCCCTCATCTTCGGGTACTTTCAATGCTTACGAATACTATTGGAAAACCAAGCCCTCCCCAAAAACTGTTCCTTCTCCTAACACGTTTACCTTTCAACACAACAATTTCTCTTCCTTAGAGAACAGTTTCAAGAGTTGCAAGGATTCTAGGAGGCCTTTTCTGTTCTGGGAACCTTATTGCATTGCTACATGA 1281 0.434 MSTCTNKKIQLPKSQRIDEETLLMQKQGIVTILGSNNDSATSLRRTLSADMSSKKWLSQNGFSPMKKIASSEEISHSLTEPTVADSSSSSEDDNSEEMKQNRIQFWKTIQKEENVEKPGEFDVWSSILSKKANEESSKSTTLPYVHPLVRRSKSCLSEKSLEICTESLGSETGSDGFSSYSPSETEDSDEEKEDKKEEEKEKEKVELSHEGEFQVPKQNHVVKKSSPRSFPPPLPSLHMQSHRDNGRLFIQAVSVPSQNNFSAQRENGRLVLTFADRSEEEAEEEEFEEGDDEAEELDSCGKEQVHAPMLSCRGIGLALTMKKPSDSNRTAKWSEKLNDVVNFKDVDVAQHSPLPPRPRARLIPSSSGTFNAYEYYWKTKPSPKTVPSPNTFTFQHNNFSSLENSFKSCKDSRRPFLFWEPYCIAT* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00597 426 MobiDBLite consensus disorder prediction 73 89 - -
Lapu5g00597 426 MobiDBLite consensus disorder prediction 195 217 - -
Lapu5g00597 426 Coils Coil 188 208 - -
Lapu5g00597 426 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 40 426 IPR021410 -
Lapu5g00597 426 MobiDBLite consensus disorder prediction 167 183 - -
Lapu5g00597 426 MobiDBLite consensus disorder prediction 73 101 - -
Lapu5g00597 426 Pfam Fantastic Four meristem regulator 229 274 IPR046431 -
Lapu5g00597 426 MobiDBLite consensus disorder prediction 167 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00597 Lapu-Chr5 5498450 5500386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00597 - - gmx:100790085 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00597 5 5498450 5500386 Lapu5g00597 5 5498450 5500386 ECH
Lapu5g00597 5 5498450 5500386 Lapu11g00270 11 5658298 5660848 PCT