Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00270 ATGTCAGCACCTTCTATTGCCATGACCAACAACATCAACAACAAGGTTCAAAGTCAAAGCCTATTATCTTCTTCTTCCTCCTCTGCGAGGATAGAAGAAGAGACCATGATGCAGAAGCAGGGAATCATCACCATTTTGGACTCAAAAACAAACACAAACACAGTTTCTTCTGCTTCTTCTCTGCGAAGAGCTCTCTCGGCAGACATGTCCTCAAAGAACTGGCTCTCTCAAACCATTGCTCCTTCCCAAGAAATCGAGCATGCCAAAACCATTGGTGGCTCGGAAGATGAAGAGAGCAGTAACAAGGAGCTTGAAGATGAAGCTGAAAGAGAGAGGCTCGAGATTTGGAGTTCCATCCAACGGAACAAGAAGGAGGAGCAAGAGAAATCAGGGCCGTTTGATACGTGGAGCTCAATCATATCCCTGAAAGGAAAAGATGAAATCTCGAAATCTCTTCCTGTGTCGCCTTATGTTCACCCTCTTGTGAAAAGGTCAAAGAGTTGTTTGAGTGAGAAGAGCCTCGAAATCTGCACAGAGAGTCTCGGATCCGAGACTGGCTCTGATGGGTTGTTGTTCTCTTCTTACTCTTCTTCTGAGACAGGGGATGCAGAGGAAGAAGAGAAAGTTGTAGAACCAACACACCAAGAAGAAGAAGAAGAAGAAGAAGAAGAGTTGAACAATTATGCTTCAGCGGTGGCTACAAAGAAGGCTTCATCACCAACACGTGCTTTCCCTCCACCACTTCCTTCTCTCTCTCATCAACAAGCTGGTCCTTCACTTCACATGCGTTCGCGCCGTGACAATGGAAGGTTGGTTCTAGAAGCTGTTTCTGTCCCTTCTCACAACAATTTCAGCATTCAGCGCCAAGGTGGTCGCCTTGTCCTCTCTTTCTCCAATCACCAAGAGAAGGTGGAGGAGGAGGAAGAAGAAGGAGAAGAAGAAGAAGAGAATGATGATTGTGTGGAGCAAGAATACTTAGGAAGGTTGGAGTTTGAGGAAGATGAGGCAGACGAGGAAGAAGAATACTCTTTTGGTACGAAACCACAAGTATCTTCCACTGGACTTAATTCTGGCTTCATGGAATATGAGAGTCTGATGAAGAAACGAACCTTGTTGTCTAGTGGGGTGACAAGTCGTGGTCATGGGTTGGCTGTAATGATGAATAATAAGAATAAGCCAATCGGGGTAGTGAACAGGAACCCAAAGTGGTCGGAGAAGTTCAATGAGATGACCAATTTTGATGATGTTAATGTGGCACAATCACTGCCTCCAAGGCCAAGGGTGGCAAGGCTGATTCCATCAGCACCAGCTGTTGCTGCAGCTGCAGCTTCTTTCAATTTCAATGCTTATGAGTACTATTGGAGGACCAACTCTGCTACATCAAAAGGTACTAGTGTTAAACTTAACCCACTTGACCAAAACAAAAAACATCATCACAATCATCAAGAGAACATGAAGAGCAAGGTTGTTGTCTCTGGGGACATGAACAAGGTGGTCTCAAAGGAGCAACAACAGTTGCTGGTTCTAAGAGGGAAGAATGGTGACTACTTGGTTCACAATTTGAAGAGTTGCAAGGATTCTAGAAGGTCGTTTCTGTTCTGGGAACCCTATTGCATTGCCACCTCTTGA 1629 0.45 MSAPSIAMTNNINNKVQSQSLLSSSSSSARIEEETMMQKQGIITILDSKTNTNTVSSASSLRRALSADMSSKNWLSQTIAPSQEIEHAKTIGGSEDEESSNKELEDEAERERLEIWSSIQRNKKEEQEKSGPFDTWSSIISLKGKDEISKSLPVSPYVHPLVKRSKSCLSEKSLEICTESLGSETGSDGLLFSSYSSSETGDAEEEEKVVEPTHQEEEEEEEEELNNYASAVATKKASSPTRAFPPPLPSLSHQQAGPSLHMRSRRDNGRLVLEAVSVPSHNNFSIQRQGGRLVLSFSNHQEKVEEEEEEGEEEEENDDCVEQEYLGRLEFEEDEADEEEEYSFGTKPQVSSTGLNSGFMEYESLMKKRTLLSSGVTSRGHGLAVMMNNKNKPIGVVNRNPKWSEKFNEMTNFDDVNVAQSLPPRPRVARLIPSAPAVAAAAASFNFNAYEYYWRTNSATSKGTSVKLNPLDQNKKHHHNHQENMKSKVVVSGDMNKVVSKEQQQLLVLRGKNGDYLVHNLKSCKDSRRSFLFWEPYCIATS* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00270 542 MobiDBLite consensus disorder prediction 181 262 - -
Lapu11g00270 542 MobiDBLite consensus disorder prediction 305 320 - -
Lapu11g00270 542 MobiDBLite consensus disorder prediction 1 33 - -
Lapu11g00270 542 Coils Coil 297 324 - -
Lapu11g00270 542 MobiDBLite consensus disorder prediction 181 199 - -
Lapu11g00270 542 MobiDBLite consensus disorder prediction 211 226 - -
Lapu11g00270 542 Coils Coil 94 114 - -
Lapu11g00270 542 MobiDBLite consensus disorder prediction 300 320 - -
Lapu11g00270 542 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 57 541 IPR021410 -
Lapu11g00270 542 MobiDBLite consensus disorder prediction 77 110 - -
Lapu11g00270 542 Pfam Fantastic Four meristem regulator 243 297 IPR046431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00270 Lapu-Chr11 5658298 5660848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00270 - - vra:106776294 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00597 5 5498450 5500386 Lapu11g00270 11 5658298 5660848 PCT