Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00583 ATGTCCAAGGACTGCAGCCACCACCACGACGAGCGCCAGAAGCTCCTCCGCCGTGTATTCGCGGCCATCCTCGGCTTCATCTTCCTAGTCCTCCTCGTAGTCTTCCTCATCTGGATCATCCTCCGCCCCACCAAACCCCGCTTCGTCCTCCAAGACGCCACCGTCTACGCATTCAACCTCTCCTCCAGCGGCGCCACCCCCTCCCCCACCGCCCCCACCCCCAACACCCTAACCCTCACCATGCAGGTCACTCTCTCCGCCTTCAACCCCAACCACCGCGTCGGCGTCTACTACACCAAACTCGACGCCTACGCCTCCTACCGCGGCCAGCAAGTCTCCCTCGCCACCGCCCTCCCCCCCACCTACCAGGGCCACCGCGACACCGCCGTCTGGTCCCCCTTCCTCTATGGCACCGCCGTCCCCGTCTCCCCCTTCATGCTCGAGATTCTCCAGCAGGACAAAATCTCTGGAGGAGTGCTGGTCAACGTCATAGTCAACGGCAGAGTCAAGTGGAAAGTGGGTACTTGGGTCTCCGGAAGGTACCATATTAACGTGAACTGTCCCGCGTATATCAGGCTCGCCGGTGACGGTGATGACGCCATCGGAGTAGCGGCTCCGGCCGTGAAGTTTCAGCTTTTCCAAAGTTGCATTGTTGATGTTTAG 663 0.6094 MSKDCSHHHDERQKLLRRVFAAILGFIFLVLLVVFLIWIILRPTKPRFVLQDATVYAFNLSSSGATPSPTAPTPNTLTLTMQVTLSAFNPNHRVGVYYTKLDAYASYRGQQVSLATALPPTYQGHRDTAVWSPFLYGTAVPVSPFMLEILQQDKISGGVLVNVIVNGRVKWKVGTWVSGRYHINVNCPAYIRLAGDGDDAIGVAAPAVKFQLFQSCIVDV* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00583 220 PANTHER OS05G0367900 PROTEIN 17 202 IPR044839 GO:0098542
Lapu5g00583 220 Coils Coil 213 220 - -
Lapu5g00583 220 Pfam Late embryogenesis abundant protein 84 187 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00583 Lapu-Chr5 5331248 5332206 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00583 - - pvu:PHAVU_005G120900g 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00583 5 5331248 5332206 Lapu5g00583 5 5331248 5332206 ECH
Lapu5g00583 5 5331248 5332206 Lapu11g00284 11 5916441 5917304 PCT