Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00284 ATGTCCACCAAGGACTGCGGCCACCACCACTCTTCGAGCCGCCGTCTCCTCCGCCTCGTCCTCATTGGCGCCGCGGCCTTCATCCTCCTCATCCTCCTCGTTATCTTCCTCATATGGGTCATCCTCCGCCCCACCAAGCCCCGCTTCACGCTCCAAGATGCCACCCTCTACTCCTTCAACCTCTCCTCCCCCATCCCCAACACCCTCTCCCTCACCATGCAGGTCACCCTCTCCGCTCACAACCCTAATGCCCGCATCGGCGTCTACTACCACGCACTCCGCCTCCACGCTTCCTACCGCAGCCAGCAGATCTCCCTCCCCACCGCCCTCCCCGACACATACCAGGGCCACCACGACTTCACCGTCTGGTCGCCCTTCCTCTACGGTAACACCGTCCCCGTCGCGCCGTTTGTTCTCGCCTCCCTGCAGCAGGACCAGGGTGCCGGCACCGTTATGGTCAACGTTAAGGTCAACGGGAGAGTTAAGTGGAAGGTTGGAACTTGGGTCTCTGGAAGGTACCACATTTATGTTAACTGTCCCGCGTATATTAGCTTCGCCGGAGATCGGAGCAATGCCGTAGGAGTGAAGTTTCACCTCTTGCAAAGTTGCAGTGTTGATGTGTAG 624 0.5946 MSTKDCGHHHSSSRRLLRLVLIGAAAFILLILLVIFLIWVILRPTKPRFTLQDATLYSFNLSSPIPNTLSLTMQVTLSAHNPNARIGVYYHALRLHASYRSQQISLPTALPDTYQGHHDFTVWSPFLYGNTVPVAPFVLASLQQDQGAGTVMVNVKVNGRVKWKVGTWVSGRYHIYVNCPAYISFAGDRSNAVGVKFHLLQSCSVDV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00284 207 PANTHER OS05G0367900 PROTEIN 22 205 IPR044839 GO:0098542
Lapu11g00284 207 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00284 Lapu-Chr11 5916441 5917304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00284 9 179 EF-hand Containing Proteins AT5G21130 22.222 3.87e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00284 - - gmx:100812905 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00583 5 5331248 5332206 Lapu11g00284 11 5916441 5917304 PCT