Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00426 ATGTTGGCAATTTTCCGTCAATACACCTTCGACGACTCGTTCGAGCAGGTCTTCGTCTCCAACAAGTTCCTGAAGGAGTACCAGATCGCCCTCACCTTCGCCACCGACTACGACGACGACGACCACCCCACCAACGGCTTCTTCCGCCCCACCTGGGACCTCACCAAGGTCACACCCGAAGCCATCGAGCAGTTCAAGGAGAAGAGCCGCCAAATGGACGTGGACGTCAAAGTCTTCATCTCCATCGGCAACCGTGGCACCCACCAGCCCTTCAAACCCCTCGACAACCAGACGTGGATCGCCAACGCCACCGACTCCCTGACCAGCCTCATCCGGAGCGAGGAGTACAACCTCCACGTGGACGGCATTGACGTGCTGTACGAGCACATCGACGCCTCCTCCGGTGACTTTATCGAGTGCGTGGGACAGCTGATAAGGAACCTGAAGGAGAATGGGGTGATCAGCGAAGCTTCCATTTCCCCCTGCTCTGAGCTGAACAAGGAGTTCTACTTCCCCTTGTACACCTCTGTGTCGTTCTTGGTTGATTTTGTGGATTACCAGTTCCAGAAGGAGGTTCGTTTCGTCACGAACCCGGGTAACTTGTTGCAGAGGTACAATGAACTAACGAAGGAGTATCCGAGAAGGAAGGTGTTGGCTGGGTACAGCGCCGAGAACGAGGACTGGACCACTCTCTCACCCATCGTCTTCTTCCTCGGTGGCATGGACATTCTCAAGAAGAGAAAGGCTCCTGGTGTTTCCATTCATTACCATAATTTCTACGCTCAATCTCCTCATCATGAATGA 804 0.541 MLAIFRQYTFDDSFEQVFVSNKFLKEYQIALTFATDYDDDDHPTNGFFRPTWDLTKVTPEAIEQFKEKSRQMDVDVKVFISIGNRGTHQPFKPLDNQTWIANATDSLTSLIRSEEYNLHVDGIDVLYEHIDASSGDFIECVGQLIRNLKENGVISEASISPCSELNKEFYFPLYTSVSFLVDFVDYQFQKEVRFVTNPGNLLQRYNELTKEYPRRKVLAGYSAENEDWTTLSPIVFFLGGMDILKKRKAPGVSIHYHNFYAQSPHHE* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00426 267 Pfam Glycosyl hydrolases family 18 41 232 IPR001223 GO:0005975
Lapu5g00426 267 Gene3D Glycosidases 3 265 - -
Lapu5g00426 267 SUPERFAMILY (Trans)glycosidases 28 255 IPR017853 -
Lapu5g00426 267 PANTHER CHITINASE 2-LIKE 4 258 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00426 - - gmx:100776259 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00426 5 3542177 3543222 Lapu5g00426 5 3542177 3543222 ECH
Lapu5g00426 5 3542177 3543222 Lapu11g00522 11 8614374 8615297 PCT