Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00522 ATGAACTTTCGCATCGCCAAATTCACTCTTAAACCTTTCTTCTTCATCTTCATGTTACTCGCATCAACCCATGCAGGAACAACCTCCACCCCAAGTTCAAACCTGTTCCGAGAATACATAGGAGCCGAGTTCAACAACGTTAAATTCTCCGATGTCCCTATTAACCCAAGTGTCCAATTCCACTTCATTCTCTCCTTCGCCATCGACTACGACACCTCATCATCATCCTCTCCCACCAATGGAAAATTCAACATCTTTTGGGACACCAACAACCTTAACCCTACCCAAGTCTCCGCCATCAAAGCCAAAAACTCCAACGTCAAAGTAGCCCTCAGTCTCGGAGGAGACAGCGTTGGAGGTGGCTACGCTTACTTCAACCCCTCTTCGATCGATTCCTGGGTTTCCAACGCCGTTTCTTCACTCACAAGCATAATCAAAGAGTACAACTTAGACGGAATCGACATCGACTACGAGCACTTCAAAACGGACCCTGAAACCTTCTCGGAGTGTGTGGGGAGGCTAATCAAGACGCTGAAATCCAACGGGGTTATCAAATTTGCCTCCATTGCTCCTTTCGACGATGACCAAGTTCAGAGCCACTACTTGGCCTTGTGGAAGAGTTATGGGAGCTTCATAGACTACGTTAACTTTCAGTTTTATGCGTATGACAAGGGCACTAGTGTGGCACAGTTCATCGACTACTTCAACACGCAGAGTTCGAATTACAAGGGTGGAAAGGTTTTGGTGAGTTTCATCAGTGATGGGAGTGGTGGCTTGGCCCCGAATGAAGGGTTCTTCACAGCATGTCACACGCTAAGGAGTGAGCAAAACCTTCATGGTATCTTTGTGTGGTCTGCTGATGACTCCACGGGAAATGGTTTTCGTTATGAGAAACAATCACAAGCCCTTTTAGCTTTACCCTAG 924 0.4675 MNFRIAKFTLKPFFFIFMLLASTHAGTTSTPSSNLFREYIGAEFNNVKFSDVPINPSVQFHFILSFAIDYDTSSSSSPTNGKFNIFWDTNNLNPTQVSAIKAKNSNVKVALSLGGDSVGGGYAYFNPSSIDSWVSNAVSSLTSIIKEYNLDGIDIDYEHFKTDPETFSECVGRLIKTLKSNGVIKFASIAPFDDDQVQSHYLALWKSYGSFIDYVNFQFYAYDKGTSVAQFIDYFNTQSSNYKGGKVLVSFISDGSGGLAPNEGFFTACHTLRSEQNLHGIFVWSADDSTGNGFRYEKQSQALLALP* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00522 307 Gene3D Glycosidases 32 306 - -
Lapu11g00522 307 SUPERFAMILY (Trans)glycosidases 33 299 IPR017853 -
Lapu11g00522 307 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 150 158 IPR001579 GO:0004553|GO:0005975
Lapu11g00522 307 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 34 307 IPR001223 GO:0005975
Lapu11g00522 307 CDD GH18_narbonin 35 289 - -
Lapu11g00522 307 PANTHER CHITINASE 2-LIKE 14 305 - -
Lapu11g00522 307 Pfam Glycosyl hydrolases family 18 61 224 IPR001223 GO:0005975
Lapu11g00522 307 PRINTS 2-S globulin family signature 33 46 IPR000677 -
Lapu11g00522 307 PRINTS 2-S globulin family signature 267 286 IPR000677 -
Lapu11g00522 307 PRINTS 2-S globulin family signature 97 115 IPR000677 -
Lapu11g00522 307 PRINTS 2-S globulin family signature 80 95 IPR000677 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00522 - - vum:124843731 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00426 5 3542177 3543222 Lapu11g00522 11 8614374 8615297 PCT