Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00411 ATGGCGGAATCATCCACTAGTTCTGCTATTTCAGTTGATTCCATTTCCAGAGACAACAACAGGTTGTGGAAAGGGGCATTTGCAGTCGCTGGAATCATGGTTACCCTCGTTACCTATGGTCTCTTGCAGGAAAAGATCATGAGAGTACCATACGGGGCAGAAAAAGAGTATTTCAAGTATTCTCTGTTTCTTGTTTTCTGCAACCGCATCACAACATCTGCTGTCTCTGCTGGTTCTTTGCTGGCAAGTAAAAAGTCTATGGACCCAGTAGCTCCTATTTTTAAGTATTGCCTTATCTCGGTATCAAACATACTAACTACAACTTGCCAGTACGAGGCTCTCAAATATGTTAGTTTTCCTGTTCAGACCCTTGCAAAATGTGCAAAAATGATACCAGTTATGGTCTGGGGTACCATCATCATGCAGAAGAGATATCATGGACCTGACTATTTGTTGGCTTTTTTAATTACCCTTGGCTGCTCAGTATTTATCCTATATCCGGTAATTATTGGGTCTTTGACCTACTTTGTTTTCTACTGGAGAGAGTCAGTTGAGGCAGGAACAGACATAAGTCCTTACAGTAGAGGAAGGGAAAATACAGTTTGGGGTGTCCTCCTAATGGTTGGCTATCTTGGGTTTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTTAGAGGCTATGACATGGAGATACATAATCAGATATTTTACACAACATTATGTTCTTGTATTCTTAGCCTGACAGGTCTTATCTTACAAGGGCATCTAATACCAGCAATTGAATTTGTTTATCTCCATCATGATTGTTTCTTTGACATAGCATTGCTTTCAACAGTTGCAACAATTAGTCAATTTTTTATTTCGTACACAATTCGCACTTTTGGTGCTCTGACTTTTGCAACCATAATGACCACAAGACAGTTGGTGAGCATTATGCTGTCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGTGTATTGGAGCTGTCATTGTCTTTGGATCCCTTTATGGAAAAAGCTTCTCGAGGAAAGCACCTCAAAAGACAACCTCCTCAGCAGAACTTGTTCAAAATGGGGATTCAAATAATTTGAAGGACAATCCATGA 1113 0.4043 MAESSTSSAISVDSISRDNNRLWKGAFAVAGIMVTLVTYGLLQEKIMRVPYGAEKEYFKYSLFLVFCNRITTSAVSAGSLLASKKSMDPVAPIFKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMVWGTIIMQKRYHGPDYLLAFLITLGCSVFILYPVIIGSLTYFVFYWRESVEAGTDISPYSRGRENTVWGVLLMVGYLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAIEFVYLHHDCFFDIALLSTVATISQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQCIGAVIVFGSLYGKSFSRKAPQKTTSSAELVQNGDSNNLKDNP* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00411 370 Pfam UAA transporter family 26 342 IPR013657 GO:0055085
Lapu5g00411 370 MobiDBLite consensus disorder prediction 350 370 - -
Lapu5g00411 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 274 342 - -
Lapu5g00411 370 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 19 346 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00411 Lapu-Chr5 3388145 3395228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00411 18 359 Organic Solute Cotransporters AT5G59740 75.872 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00411 K15276 - gmx:100782989 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00411 5 3388145 3395228 Lapu5g00411 5 3388145 3395228 ECH
Lapu5g00411 5 3388145 3395228 Lapu11g00542 11 8799701 8805027 PCT