Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00542 ATGTCGGAAACAACCTCTGCTTCTGTTTCTTCTTCCACGAGTGATTCGAATTGGAGAGAGAACAAGTTGTGGAAAGGCACATTTGCGGTCTCCGGAATCATGCTCACCCTCGTTACCTATGGCGTCTTGCAGGAAAAGATCATGAGAGTCCCTTATGGGGAGAACAAGGACTACTTCAAATATTCTCTTTTTCTTGTTTTCTGCAACCGCGTCACGACGTCTGCTGTTTCGGCTGGGGCTCTGCTGGCAAGTAACAAAGTTTTGGATCCTGTTGCCCCCATTTATAAGTACTGCCTTGTGTCAGTATCGAACATTCTTACCACGAGTTGTCAGTATGAGGCCCTCAAGTATGTTAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTCATGGTCTGGGGCACTGTCATAATGCAGAAGAAATATCGAGGAACTGATTATTTGCTGGCCTTTATAGTAACCCTTGGCTGCTCAGTGTTCATCCTATATCCTGCAGGGACTGACATAAGTCCATACGGTAGAGGAAGGGAAAATACTGTTTGGGGAGTTTTGCTAATGATTGGTTATCTCGGGTGTGATGGTTTTACAAGCACCTTCCAAGATAAGATGTTTAAAGGCTATAACATGGAGATACATAATCAGATATTCTATACTACTTTGTGTTCTTGTGTTCTTAGCCTGACAGGCCTTATCATACAAGGACAATTATTACCGGCAGTAGAGTTTGTTTATCTCCATAAGGATTGTTTCTTTGACATTGCATTGCTTTCAACTGTTGCAACAGCTAGTCAATTTTTTATTTCCTACACAATTCGCACATTTGGTGCTCTAACATTTGCCACTATAATGACCACCAGACAGTTGGTAAGCATCATGCTATCATGTGTGTGGTTTGCGCATCCTCTTAGCTGGGAACAATGGATTGGAGCTGTTATTGTCTTTGGTGCAATTTATTCAAAAAGCTTCTTGAGGAAAGCACCTGAAAAGACAACAACATCTTCTGTAGAACTTGCACAAAATGGAAATTCAGATAATTTGAAGGAGAACCCATGA 1065 0.4178 MSETTSASVSSSTSDSNWRENKLWKGTFAVSGIMLTLVTYGVLQEKIMRVPYGENKDYFKYSLFLVFCNRVTTSAVSAGALLASNKVLDPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTVIMQKKYRGTDYLLAFIVTLGCSVFILYPAGTDISPYGRGRENTVWGVLLMIGYLGCDGFTSTFQDKMFKGYNMEIHNQIFYTTLCSCVLSLTGLIIQGQLLPAVEFVYLHKDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQWIGAVIVFGAIYSKSFLRKAPEKTTTSSVELAQNGNSDNLKENP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00542 354 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 17 329 IPR013657 GO:0055085
Lapu11g00542 354 Pfam UAA transporter family 27 325 IPR013657 GO:0055085
Lapu11g00542 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00542 Lapu-Chr11 8799701 8805027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00542 19 343 Organic Solute Cotransporters AT5G59740 81.902 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00542 K15276 - gmx:100782423 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00411 5 3388145 3395228 Lapu11g00542 11 8799701 8805027 PCT