Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00391 ATGGCAACAGATTCATCTAATGGTAATGGACATCACCAGACAACAGCAAAGAAACCTCCTTCACCATCTCCCCTGCGCTTTTCCAAATTTTTTCAGTCCAACATGAGAATCTTGGTTACTGGAGGAGCTGGATTCATTGGATCTCACTTAGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCGGACAACTACTTCACTGGATCCAAGGACAACCTACAAAAGTGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACGGAGCCTTTGTTGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCCTCTCCTATTTTCTACAAATACAATCCAGTGAAGACTATAAAGACAAATGTGATTGGAACCCTGAATATGCTTGGGCTTGCAAAGCGAGTAGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGAGATCCTCTTGTGCATCCCCAACCTGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTCCGTAGTTGTTATGATGAGGGTAAACGGGTGGCTGAGACTTTGATGTTTGATTACCATAGGCAGCATGGGATTGAAATACGCATTGCAAGAATCTTTAACACATATGGACCACGCATGAATATTGATGATGGGCGGGTTGTTAGCAACTTCATTGCTCAAGCACTTCGGGGGGAACCCTTGACAGTCCAATGTCCAGGAACACAAACTCGAAGTTTCTGCTATGTCTCTGACCTGGTTGATGGCCTTATCCGCCTCATGGAAGGACCGAACACTGGGCCAATCAACCTTGGAAACCCTGGTGAATTTACAATGATTGAACTTGCTGAGACTGTGAAAGAGCTTATCAATTCAAATGTTGAGATCAAGATGGTGGAGAACACTCCTGATGATCCGAGACAAAGAAAACCAGACATAACAAAAGCAAAAGAATTGTTGGGATGGGAGCCAAAGGTGAAGTTGAAGGATGGTCTTCCTCTTATGGAAGAGAATTTCCGTCTGAGGCTAGGAGTTGGCAAAAAGAATTAA 1047 0.4327 MATDSSNGNGHHQTTAKKPPSPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLQKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQCPGTQTRSFCYVSDLVDGLIRLMEGPNTGPINLGNPGEFTMIELAETVKELINSNVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLKDGLPLMEENFRLRLGVGKKN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00391 348 Gene3D - 32 162 - -
Lapu5g00391 348 Gene3D - 163 342 - -
Lapu5g00391 348 FunFam UDP-glucuronic acid decarboxylase 6 34 343 - -
Lapu5g00391 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 30 339 IPR036291 -
Lapu5g00391 348 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 18 343 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lapu5g00391 348 CDD UGD_SDR_e 35 339 - -
Lapu5g00391 348 Pfam GDP-mannose 4,6 dehydratase 38 332 IPR016040 -
Lapu5g00391 348 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00391 Lapu-Chr5 3246048 3251114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00391 32 331 Miscellaneous Gene Families AT1G02000 24.179 5.72e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00391 K08678 - gmx:100790835 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00391 5 3246048 3251114 Lapu5g00391 5 3246048 3251114 ECH
Lapu5g00391 5 3246048 3251114 Lapu11g00560 11 8922663 8928389 PCT