Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu5g00360 | ATGGAAAACGGGGATCAGTTCCAGGGGATTTCTAAGGCGAAATACGATTGTCTTTTATTTGATCTTGATGAAACCCTTTATCCTTTGAGTTCTGGATTGGCTGAGCAAGTGAACAAAAATATCCAGGAGTACATGCTTCAAAAGCTTGGGATACCAGAGGCTAAAGTTCCTGAATTGTGTTTGTCCTTGTACAAGACTTATGGTACAACCATGGCTGGTCTCAAGGCTATTGGCTATGACTTTGACTATGATGATTTCCATAGCTTTGTTCACGGGAGATTGCCATATGATATACTGAAACCTGACCCTGTTCTCAGGGGAGTTTTGCTAAGCTTTCCTGTTAGAAAAATTATTTTTACAAATTCAGACAAGGCCCACGCTAGTAGAGTGCTTCACAGACTTGGATTGGAGGATTGCTTTGAAAGAGTTATAAGCTTTGAGACCCTGAATTCCTCCAATGAAGATGGAAGTGAATATAAACCAAGTTCCACAGAGTTTTTTGATTTTTATGAGTACATTCACAGGCCTGATTCTGATGTAGTGCTTCCAAGGACCCCGGTTGTATGCAAACCCTTTCAAGATGCATTTGAAAAGGTTTTCAATATGGCAGAAATAGACCCTCGAAAGACATTATTCTTTGATGACAGTCTCCGCAATTTACAAACGGGCAAATCCTTGGGCCTTCATACAGTCTTGGTGGGTACTTCTGTTAGAACTACGGGAGTGGATCATGCCTTAGAGAGCATCCATAATATGAAGGAGGCATTTCCAGAACTGTGGGAAAGCGATGAGAAGTCTGAAAGTGTGGAATGTTCTAGAAAGGTTTCAATTGAGACATCAGTAGTGGCTTAA | 852 | 0.4096 | MENGDQFQGISKAKYDCLLFDLDETLYPLSSGLAEQVNKNIQEYMLQKLGIPEAKVPELCLSLYKTYGTTMAGLKAIGYDFDYDDFHSFVHGRLPYDILKPDPVLRGVLLSFPVRKIIFTNSDKAHASRVLHRLGLEDCFERVISFETLNSSNEDGSEYKPSSTEFFDFYEYIHRPDSDVVLPRTPVVCKPFQDAFEKVFNMAEIDPRKTLFFDDSLRNLQTGKSLGLHTVLVGTSVRTTGVDHALESIHNMKEAFPELWESDEKSESVECSRKVSIETSVVA* | 284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu5g00360 | 283 | SFLD | Haloacid Dehalogenase | 12 | 262 | - | - | |
| Lapu5g00360 | 283 | SFLD | C1.5.3: 5'-Nucleotidase Like | 12 | 262 | IPR010237 | - | |
| Lapu5g00360 | 283 | Gene3D | - | 7 | 99 | - | - | |
| Lapu5g00360 | 283 | NCBIfam | pyrimidine 5'-nucleotidase | 16 | 233 | IPR010237 | - | |
| Lapu5g00360 | 283 | Gene3D | - | 109 | 267 | IPR023214 | - | |
| Lapu5g00360 | 283 | PANTHER | HALOACID DEHALOGENASE-LIKE HYDROLASE | 11 | 281 | - | - | |
| Lapu5g00360 | 283 | CDD | HAD_5NT | 17 | 235 | IPR010237 | - | |
| Lapu5g00360 | 283 | SUPERFAMILY | HAD-like | 15 | 254 | IPR036412 | - | |
| Lapu5g00360 | 283 | NCBIfam | HAD-IA family hydrolase | 182 | 233 | IPR006439 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lapu5g00360 | Lapu-Chr5 | 2992260 | 2994510 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu5g00360 | K07025 | - | gmx:100790444 | 532.332 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lapu5g00360 | 5 | 2992260 | 2994510 | Lapu11g00588 | 11 | 9167494 | 9170357 | PCT |