Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00588 ATGGAAGAGGGACATAAGTTCCAGGAAGTTCAAAAGCCTAAATATGATTGTCTTTTGTTTGATCTTGATGACACCCTTTATCCTTTTAGTTCTGGAGTTTGTGAACAAATAGCAAAAAACATCGAAGAATATATGATTCAAAAGCTTGGGATAGAGGCTGATAAAGTTGCCGAATTGAACGTTCCATTGTACAAGACTTATGGAACAACGATGGCTGGTCTAAGGGCAATTGGCTATGACTTTGACTATGACGAGTATAATAGTTTTGTTCATGGGAGATTGCCATATAATGTGTTGCTGAAACCAGACCCTGTTCTCAGGGGCATTCTGCAAAGCTTGCCTATTAGGAAGATTATTTTTACAAATGCAGATTCGAACCACGCAAGTAGTGCACTTAAAATCCTTGGATTGGAGGACTGTTTTGAAAGAATTATAAGCTTTGACACTCTGAATCCCTCCAATCACACCAATTCTTCAAATGACAAAGATGACATATCCAGACCTACGGCCGCAGGAGTTTTGGACTTCTGTGAGCGTATGCGCAGGCATGACTCTGATATAGTGCTTCCAAGGACCCCACTTGTCTGCAAACCCTTTGATGATGCATTTGAACTTGCTTTCAAGTTAGCAAACATTGATCCTCAAAGAACATTGTTTTTTGACGACAGCATCCGCAATTTACAGACAGCCAAACGCTTGGGCCTCCATACAGTTGTGGTGGGAACATCTGTTCGTACAACGGCAGTTGATCATGCATTGGAGAGTATTCATAATATGAGAGAGGCATTTCCAGAGCTTTGGGATGCCGAGGAGAAGCATGATTTTGTGCACTACAAGGCTGGAATTGAAACATCAGTAAAAGCTTAG 867 0.4118 MEEGHKFQEVQKPKYDCLLFDLDDTLYPFSSGVCEQIAKNIEEYMIQKLGIEADKVAELNVPLYKTYGTTMAGLRAIGYDFDYDEYNSFVHGRLPYNVLLKPDPVLRGILQSLPIRKIIFTNADSNHASSALKILGLEDCFERIISFDTLNPSNHTNSSNDKDDISRPTAAGVLDFCERMRRHDSDIVLPRTPLVCKPFDDAFELAFKLANIDPQRTLFFDDSIRNLQTAKRLGLHTVVVGTSVRTTAVDHALESIHNMREAFPELWDAEEKHDFVHYKAGIETSVKA* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00588 288 NCBIfam pyrimidine 5'-nucleotidase 16 240 IPR010237 -
Lapu11g00588 288 SFLD C1.5.3: 5'-Nucleotidase Like 11 268 IPR010237 -
Lapu11g00588 288 SUPERFAMILY HAD-like 17 244 IPR036412 -
Lapu11g00588 288 Gene3D - 105 277 IPR023214 -
Lapu11g00588 288 SFLD Haloacid Dehalogenase 11 268 - -
Lapu11g00588 288 NCBIfam HAD-IA family hydrolase 192 240 IPR006439 -
Lapu11g00588 288 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 7 287 - -
Lapu11g00588 288 Gene3D - 6 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00588 Lapu-Chr11 9167494 9170357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00588 K07025 - gmx:100807717 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00360 5 2992260 2994510 Lapu11g00588 11 9167494 9170357 PCT