Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00330 ATGGGTGGTGTTAGGTATATGACGGTGATAGTGGTATTCTTTATGGCACTGAGCTCCAGCGTGCGGTCGTGTCCGCCATCGGACAGGGACGCGCTGCTGGCATTCAAGGCAGCGCTCCGTGAACCCTACCTCGGAATCTTCAACTCGTGGACCGGTGCCGACTGCTGCCACAACTGGTATGGAGTTAGCTGCGACCAGGAGACCCGCCGCGTCGCTGACATCAACCTCCGCGGCGAGTCGGAGGAGCCGATCTTCGAGAGAGCGCACCGGACTGGCTACATGACCGGCTACATCTCGCCGGCGATCTGCAAGCTCGCGCGTCTCTCCAGCATCACCATCGCAGACTGGAAGGGAATCTCCGGCGAGATACCGCGCTGCATCACAACCCTACCATTCCTCCGCATCGTCGACCTCATAGGAAACCGCATCTCCGGTAGCATCCCCGCAGACATCGGCAGGCTCCACCGCCTAACGGTGCTCAACTTCGCCGACAACCGAATCTCCGGCACGATCCCGGCGTCGCTCGCGAACCTCACGAGTCTCATGCACTTGGATCTCCGTAACAACCTCCTCTCCGGGCCCATTCCAAGGAACGTCGGTTCTCTCCGAATGCTGAGCAGGGCCTTGCTCAGTGGAAACCGCCTCAGTGGGCCCATCCCGGGCTCGGTTTCACTCATTTACCGTCTGGCGGATCTGGATCTATCTCGAAACCAACTCTCGGGGCCCATTCCGCAGTCACTTGGTAAAATGGCGGTGTTATCGACGCTGAATTTGGATTTGAATAAACTTTCTGGGCCCATTCCTTGGAGCCTGTTTAGTTCGGGTATTAGTGACCTAAACTTGAGCCGAAACGCGTTGGAGGGTAACATACCCGACGCGTTTGGGGCTAGGTCTTATTTCACTGCTCTTGATTTGTCCTACAATAATCTGAGAGGGGCCATACCCAAATCCATATCCTCTGCTTCCTACATTGGACACTTGGATTTGAGTCACAACCATCTCTGTGGCAAGATTCCCCTTGGATCTCCCTTCGATCATCTCGAAGCCTCCTCCTTTCTCTACAACGATTGTCTCTGCGGCAAGCCACTCAAACCTTGCTAA 1101 0.5595 MGGVRYMTVIVVFFMALSSSVRSCPPSDRDALLAFKAALREPYLGIFNSWTGADCCHNWYGVSCDQETRRVADINLRGESEEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCITTLPFLRIVDLIGNRISGSIPADIGRLHRLTVLNFADNRISGTIPASLANLTSLMHLDLRNNLLSGPIPRNVGSLRMLSRALLSGNRLSGPIPGSVSLIYRLADLDLSRNQLSGPIPQSLGKMAVLSTLNLDLNKLSGPIPWSLFSSGISDLNLSRNALEGNIPDAFGARSYFTALDLSYNNLRGAIPKSISSASYIGHLDLSHNHLCGKIPLGSPFDHLEASSFLYNDCLCGKPLKPC* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00330 366 Gene3D Ribonuclease Inhibitor 276 366 IPR032675 -
Lapu5g00330 366 FunFam Calmodulin-binding receptor kinase CaMRLK 212 316 - -
Lapu5g00330 366 Gene3D Ribonuclease Inhibitor 197 274 IPR032675 -
Lapu5g00330 366 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 7 273 - -
Lapu5g00330 366 FunFam Leucine-rich repeat receptor protein kinase EMS1 123 211 - -
Lapu5g00330 366 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lapu5g00330 366 SUPERFAMILY L domain-like 23 365 - -
Lapu5g00330 366 FunFam Leucine-rich repeat family protein 22 90 - -
Lapu5g00330 366 Pfam Leucine rich repeat 133 191 IPR001611 GO:0005515
Lapu5g00330 366 Pfam Leucine rich repeat 277 334 IPR001611 GO:0005515
Lapu5g00330 366 Gene3D Ribonuclease Inhibitor 26 196 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00330 Lapu-Chr5 2738017 2739543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00330 89 366 Receptor kinase-like Gene Family AT5G46330 39.085 4.18e-49 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00330 - - gmx:100804739 674.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00330 5 2738017 2739543 Lapu5g00330 5 2738017 2739543 ECH
Lapu5g00330 5 2738017 2739543 Lapu11g00641 11 9584367 9585461 PCT