Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00641 ATGGCCGGAGTTTGGTTCACGCCACTAACGGCGCTGTTACTACTCGCGATTTCCTCCGCAGTTCGCTCCTGTCCTCCGTCGGAACTGGCGGCGCTGCTGGACTTCAAATCTGCTCTCCGGGACTCTCACGACGGAACATTCAACTCCTGGACCGGCACCGACTGCTGCCGCAACTGGCGCGGCATCTCCTGCGACCACAACTCTCACCGCGTCGCGGAAATCAGCCTCCGCGCCGGTCCAGTCTACACCACGTTCGAGAAGCCTTACCGTCCAGAATACATGTCCGGTTACATCTCACCGGAGATTTGCAAGCTCGCTCACCTCTCCAGCCTCATCATCACCGACTGGCAGGGAATCTCCGGCGAGATCCCGCGCTGCATCTCCACCCTCTCCTTCCTCCGCATCATCGACCTCACCGGAAACCGCATATCTGGCACTCTGCCCGCCGACATCGGGAAGCTTCGTCATCTGAATCTTCTAAGCGCCGGCGATAACGTCATCACCGGCGAAATCCCGGGGACATTGACGAGCTTGACCGGTTTGACGCATCTGGACCTTCGTAACAACAAGATCTCTGGGCCCATCCCACGGAACTTGGGCCAGCTTCAGATGGTGAGTCGGGTCCTTTTAAGTGGAAACGAAATTAGTGGGCCTATCCCGGCCTCAATCTGTCACACATACCGTCTGGTAGATCTTGATCTGTCGAATAACCATTTATCTGGGCCCATCCCTGAAGCTTTGGGCCGGATGGCGGTTCTGTCGACGTTGAAGTTGGATAGTAACAGGCTTTCGGGAAGCATACCAGCGAGTCTTATGGGTTCGGGTATTAGCGAGTTGAACTTGAGCCACAACATGTTAGAGGGTAGTATACCTGACACGTTTGGGGGTTCATGCTATTTCACGTTACTGGACTTGTCGTATAACAACCTGAAAGGTCCAATGCCCAAATCCATGTCTTCTGCTTCGTACATTGGGTACCTGGACTTTAGCCACAACCACCTCTGCGGCCCAATTCCTAGCGCCTACAGCAACACCGACGCGTCCTCATTTGCTTACAACGATTGCCTCTGTGGAAAGCCACTCAAAGCTTGTTAA 1095 0.547 MAGVWFTPLTALLLLAISSAVRSCPPSELAALLDFKSALRDSHDGTFNSWTGTDCCRNWRGISCDHNSHRVAEISLRAGPVYTTFEKPYRPEYMSGYISPEICKLAHLSSLIITDWQGISGEIPRCISTLSFLRIIDLTGNRISGTLPADIGKLRHLNLLSAGDNVITGEIPGTLTSLTGLTHLDLRNNKISGPIPRNLGQLQMVSRVLLSGNEISGPIPASICHTYRLVDLDLSNNHLSGPIPEALGRMAVLSTLKLDSNRLSGSIPASLMGSGISELNLSHNMLEGSIPDTFGGSCYFTLLDLSYNNLKGPMPKSMSSASYIGYLDFSHNHLCGPIPSAYSNTDASSFAYNDCLCGKPLKAC* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00641 364 Gene3D Ribonuclease Inhibitor 22 88 IPR032675 -
Lapu11g00641 364 Gene3D Ribonuclease Inhibitor 92 364 IPR032675 -
Lapu11g00641 364 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 11 113 - -
Lapu11g00641 364 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 197 275 - -
Lapu11g00641 364 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lapu11g00641 364 SUPERFAMILY L domain-like 23 358 - -
Lapu11g00641 364 FunFam Nuclear pore complex protein NUP107 26 196 - -
Lapu11g00641 364 Pfam Leucine Rich Repeat 181 200 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00641 Lapu-Chr11 9584367 9585461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00641 94 364 Receptor kinase-like Gene Family AT2G15080 27.914 1.99e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00641 - - pvu:PHAVU_011G057600g 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00330 5 2738017 2739543 Lapu11g00641 11 9584367 9585461 PCT